Gossypium hirsutum (upland cotton): 107930928
Help
Entry
107930928 CDS
T04793
Name
(RefSeq) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107930928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107930928
03009 Ribosome biogenesis [BR:
ghi03009
]
107930928
Messenger RNA biogenesis [BR:
ghi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
107930928
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
RNases
107930928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
XPG_I_2
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
107930928
NCBI-ProteinID:
XP_040941903
LinkDB
All DBs
Position
A13:complement(111179136..111181202)
Genome browser
AA seq
249 aa
AA seq
DB search
MDGLSNAFSVLEIDVDDHLPLSTASTISGSATLLSFNDPGKSKSNEKGSIEDKQSEADSS
LLSENYKLPLVWIDMEMTGLDIEVDRILEIACIITDGKLTKSVEGPDLVIHQSKECLDRM
GEWCQNHHGASGLTQKVLESTVSEREAEKQVIEFVKRNVGTYRPHIAGNSIYMDFLFLKK
YMPDLASLFSHVVVDVSSIRALCMRWYPKDQENAPLKEKKHRAMDDIKESILELKYFKET
IFKAKSKKK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggacggcctctcaaatgcgttttcagtgctggagattgacgtcgacgaccatcttccg
ctatccaccgcttccacaatttcagggtcggccaccctactctctttcaatgacccaggt
aagagcaaaagtaatgaaaagggttcaattgaagataaacagagtgaagcggattcatcg
ttgctttcagagaactacaagttacctcttgtatggattgacatggaaatgactggttta
gacattgaagttgataggatcctagagatagcttgtataatcaccgatggcaagctcacc
aaatcagtggagggtcctgatctggttatccatcaatctaaagaatgtttagatagaatg
ggggaatggtgtcaaaatcatcacggagctagtggattgacacagaaagtgcttgaaagt
acagttagtgaaagagaagctgaaaaacaggtcattgaatttgtgaagagaaatgttggt
acatacagacctcatatagctggaaattctatttacatggactttcttttcttaaagaaa
tacatgcccgatttagccagtcttttctctcatgtagttgtcgacgtgagcagcatcagg
gccctttgcatgcgctggtatcctaaagatcaagagaatgcccctctcaaagaaaagaaa
cacagagccatggatgatatcaaggagagcatattagaactcaagtacttcaaagagacg
atatttaaagcaaaatcgaagaagaagtga
DBGET
integrated database retrieval system