KEGG   Gossypium hirsutum (upland cotton): 107937284
Entry
107937284         CDS       T04793                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107937284
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107937284
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HEAT_2
Other DBs
NCBI-GeneID: 107937284
NCBI-ProteinID: XP_016725636
UniProt: A0A1U8MFL2
LinkDB
Position
D06:complement(64751125..64760386)
AA seq 1152 aa
MAEPIQLSRYIESFVDSSRSLTQQAASLEAIASLLKNNQLTIETLVREMEGYLTTVDNII
RARGILLLGEVLVRLASKPLGDATIHSLIGFFTDRLADWRALRGALVGCLALMRRKSSGG
MVSGSDAKAVAESYLQNLQVQSLGQYERKLSFELMECLLERYPNAVASLGDTLIYGICES
VDGEKDPHCLMLTFHIIEVLSRLFPDPSDALAGFAHELFEILGCYFPIHFTHQKDEDMTI
KRDDLARALMLAFSSTPLFEPYAIPLLLEKLSSSLQSAKLDSLRYLTDCTMKYGADRMAK
HIEAIWSSLKEAIFTSLDSVLLFTPESLEGPDLPKNEIAAEALSLLQKLIVQNTKLFLDL
IVGDEDISMIFNTISNYKNYHEIPLERKQRLNAVGRILFTTAKASQVSCNRVFECFFSRL
MDILGLSARNSSGQPYFDESILISKRCNHGALYLSIEILSACRDMIASSETILAATSHTE
ETWKYLLQSFSPALTMGFCSAFICSSEGTHDAATYIGVKGLLILATFPGGYSLISKTVFE
KILVTFVSIINEEYSKRLSWKLALKALGEIGSFIERYHESEKEPSYMDIVVEKILSLAFV
GDFGIPFPLRLEALSDIGTSGRSYMLKVVQGLEEAIYANLYEVYVHGSTSSAEIVTHLLK
CYSDKVIPWVHCEKGFEEVLLQFAINIWNQIENSTHFNASQTNKKGVLDVMMKAMKLAVA
NCSEEKQNIIVQKSYNILSSSISFPLEELLLQERFQIAQEVDDSSSRDEWILSLFAAVTI
AVHPQTHIPNTRSIVSLFMTTLLKGNVVAAQALGSMVNKLDLKSTRGQTSSDCTLEEAMD
IILNLSLWIFDTNSSSSIQSKMISVHDTGLNDLSNGVGSCTSLQIHAILGLAWIGKGLLM
RGHEKVNDITMVFLRCLQSSGRTGISHQEKSISENNYKLDLHNSVMKTAADAFQILIGDC
EQCLNREFHAIIRPLYKQRFFSTIMPVLQSLVMKLEPLSRSFLFRASAHVIIDTPLIVVL
SDTKKVIPMLLDGLSVLSNDVVDKDVLYGLLLVLSGILMDKNGQEAVSDSAHTVVNCLVD
LTRYLHMTLVRETAMQCLIAISGLSHARIYPMRTQVLQAVIKALDDPKRAVRREAIRCRQ
AWASIASRSLHF
NT seq 3459 nt   +upstreamnt  +downstreamnt
atggcggaaccgattcaactcagtcggtacattgaatcgtttgttgattcgtctcgttct
ctgactcagcaggctgcaagtttggaggccattgcttcattgttgaagaataatcagtta
acaatagaaacactggttagagagatggaaggatatttgaccaccgtggacaacattatt
cgtgcaagaggcatcctccttcttggagaagttcttgtgcgccttgcatcaaagccattg
ggtgatgctactattcatagcttgataggatttttcacggacagattggcagactggaga
gctttacggggagcgcttgttggctgtttggctctgatgagaaggaaaagcagcggtggt
atggtcagtggaagtgatgcaaaagcagttgcagagtcctatttacagaacctacaagta
cagtctcttgggcaatatgaacggaagcttagctttgaacttatggaatgcctgctagaa
cgctaccccaatgctgttgcttcacttggtgatacccttatatatggaatctgtgaatct
gttgacggagaaaaggatcctcactgtttgatgttaacatttcacattattgaggttcta
tcgcgactattccctgatccatctgatgcccttgctggatttgctcacgaactttttgag
attttgggctgttattttcccattcatttcactcatcaaaaagatgaagatatgactatc
aaaagggatgatctcgcaagagcattgatgctagcattttcatccacaccactttttgag
ccatatgccattccattactacttgaaaagctttcatcttcacttcaatcagcaaagctt
gattctttgaggtatctaactgattgcacaatgaagtatggagcagacagaatggcaaaa
cacattgaagctatttggtcttcattaaaagaagcaatatttacttcacttgacagtgtt
ttattgttcactccagaatcccttgaaggtccagatcttccaaaaaatgaaattgcagca
gaggctctaagtcttttacagaagcttattgtgcagaacacaaaattgtttttggattta
attgttggtgatgaagacataagtatgatcttcaatacgatatctaattataagaattac
cacgaaattcctttagagaggaagcagagactgaatgcagttggtcgtatcctttttact
actgctaaggcttcacaagtgtcatgcaatagagtttttgaatgtttcttcagccgattg
atggatattctgggtctttctgctagaaactcatctggacaaccatattttgatgagagt
attttgatttccaaaagatgtaatcatggagctctctatcttagcattgagatcctttca
gcatgccgagatatgattgctagttctgaaacaatcctagcagctacttctcatacagaa
gaaacatggaagtatttgcttcaaagcttttctcctgcacttactatgggcttctgttct
gccttcatttgcagtagtgaaggtactcatgatgccgctacatacattggagtaaagggg
ttgctgattttggctaccttccctggaggctattcgctgatatcaaaaactgtgtttgag
aagatcttagttacgtttgtatccattattaatgaggagtatagcaagagactatcatgg
aaactggcacttaaagcactgggggagattggctcatttatagaaagataccatgaatct
gaaaaggaaccaagctatatggacattgttgttgaaaaaattctttcattggcttttgtg
ggagattttggcataccgtttccactcagactggaagcactctcagacattggcacaagt
gggcgaagttatatgctgaaagttgttcaagggttggaagaagccatatatgccaattta
tatgaggtttatgtccatggaagtacaagttcagcagaaattgttactcaccttttgaaa
tgctattctgataaggtgattccatgggtacattgtgaaaagggttttgaagaagttcta
ttgcaatttgctattaatatttggaaccaaattgagaatagcacgcacttcaatgctagt
caaaccaacaaaaagggagttcttgatgtgatgatgaaagcaatgaaacttgctgttgca
aattgttcagaggaaaagcaaaacataattgtgcaaaagagttacaacatactttcatca
agtatttcttttccattggaggagctgttgctgcaggaaaggtttcaaattgctcaagaa
gtggatgatagttccagtagagatgaatggattctttcactttttgctgcagtgactata
gcagttcatcctcaaacccacattccgaatacaagatcaatagtttctctgttcatgaca
acccttctcaagggtaatgttgtagcagcccaagcattgggctctatggttaacaaattg
gatctaaaatccacgagaggacaaacttcaagtgattgtaccttggaggaagcaatggat
ataattcttaacttgagtttgtggattttcgacacgaatagctcctccagtattcaatcc
aaaatgatcagtgtccatgatacaggtttaaatgatttatctaatggtgttggaagttgt
acctcccttcaaattcatgccattttgggacttgcatggatagggaaaggtttgcttatg
cggggccatgaaaaggttaatgacattactatggtctttttacggtgtttacagtcaagt
ggaagaacaggtatatctcatcaggaaaagagtatctcggagaacaattataagcttgat
ttgcataattctgtgatgaaaactgcagcagatgcgtttcagatccttataggtgactgt
gaacagtgtttgaatcgggaattccatgcaataatacgacctctatataagcaacgattt
ttctcaacaataatgcctgttttgcaatctctagttatgaaattggaaccactctcaagg
tcttttctatttcgggcttctgcacatgttattatagatactccactaattgttgtctta
agtgacaccaagaaggtaattccaatgctactggatggtttatctgtattaagcaatgat
gttgtggataaagatgttctttatggtctcctactggtcttgtctggaatattgatggac
aaaaatggtcaagaagctgtttctgatagtgcgcatacagtcgtcaattgtctcgttgat
cttacacgataccttcatatgacgcttgttcgtgagacagccatgcagtgtctcattgcc
atttctgggctatcccatgcaaggatttatccaatgagaacgcaggtactacaagctgta
ataaaggctcttgatgatccgaagagagccgtccgtcgtgaagctatccgatgcagacaa
gcatgggcatcaattgcatcaagaagtctccatttctaa

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