Gossypium hirsutum (upland cotton): 107937585
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Entry
107937585 CDS
T04793
Name
(RefSeq) starch synthase 1, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00500
Starch and sucrose metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107937585
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ghi01003
]
107937585
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
107937585
Glycosyltransferases [BR:
ghi01003
]
Polysaccharide
Storage polysaccharide
107937585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Motif
Other DBs
NCBI-GeneID:
107937585
NCBI-ProteinID:
XP_016725977
UniProt:
A0A1U8MGN5
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All DBs
Position
D09:48674475..48679906
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AA seq
656 aa
AA seq
DB search
MESLQVTRLMSCKLSANISHKACSFIPSRQLGFSSLSRRSFQNGKLTVARSDITENGGGF
GGLDDSSNSNSIEEEDDDEEEEEKNGLMLGLDRDDCGSVIALHLIPPSGEVTIDSHQDEA
ADTKGEDEGIEEEKGGEEEIRSRVTYNIVFVTAEAAPYSKTGGLGDVCGSLPGVLAGCGH
RVMVVSPRYLNGTSADKNFAGAYDVDRHIKVPCFGGEQEVAFFHEYKKGVDWVFVDHPSF
HRPGNLYGDSHGAFGDNQFRFTLLCHAACEAPLVLPLGGYTYGEKCLFLVNDWHAGLVPV
LLASKYRPFGIYKYARSILVIHNLAHQGVEPAASFKNLGLPWEWYGALEWVFPTWARTHA
LDTGEAVNILKGAIVTADRILTVSKGYAWEITTVEGGHGLNELLSSRRIVLNGIVNGIDV
TEWDSSSDEHISFHYSADDLSGKARCKTALQQELGLPIRPECPLIGFIGRLDYQKGIDLI
RWAIPELMEDNVQFVMLGSGDPLYEDWMRAAEKTYRDKFRGWVGFNVPISHRITAGCDIL
LMPSRFEPCGLNQLYAMRYGTVPVVHATGGLRDTVENFNPYAGDGSGEGTGWTFSPLTKE
SMLEALRTAIMTYRDHKSTWEALMRRGMQRDFTWETAAIHYEQVFEWACIDPPYIT
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggagtctctgcaagtaactcgtctaatgtcttgcaaattatcagccaacatatcgcat
aaagcttgcagttttataccgagtaggcaactgggttttagttctttgtcgagaaggagc
ttccaaaacggaaagttgacggttgcgagatcggatataactgaaaatggaggtgggttc
ggcggtttagacgatagctctaactccaattccattgaagaagaagatgacgatgaagaa
gaagaagaaaagaatggtcttatgctaggtttagacagggatgactgtggttctgtgatt
gccttgcatttgattcctccttctggtgaagtcaccattgactctcaccaagatgaggct
gccgatactaaaggcgaagatgagggaattgaagaagaaaaaggaggagaagaagaaatc
cgaagcagagtaacctataacatcgtgtttgttactgctgaagccgcaccgtattcaaag
actggcggattaggagatgtttgcggttctttgccgggcgtgctggctggctgcggacat
cgagtcatggttgtttctcctagatacctcaacggaacgtccgccgacaaaaatttcgct
ggtgcttatgatgttgatcgccacattaaggtaccttgcttcggaggggagcaagaggtt
gcattcttccatgagtataagaagggtgttgattgggtatttgtggaccatccttcattc
catagacctggaaatctatatggtgatagtcatggtgcttttggtgataatcagtttcgg
tttactttactttgccatgcagcatgtgaagctcccttagtgcttccattgggagggtat
acctatggcgagaagtgtctcttccttgtcaatgattggcatgccggtctagtccccgtg
cttttggcttccaaataccgtcctttcggaatttataagtatgctcggagcatccttgta
attcataaccttgcacatcagggagtggaacctgcagcaagctttaagaacttgggactg
ccatgggagtggtatggggcattggaatgggtgtttcctacatgggcaaggacgcatgct
ctcgacacaggggaagccgtcaatattttaaagggtgcaatcgtgacagcagatcgaata
cttaccgttagcaagggctatgcatgggaaataacaacggttgaaggtggacatggttta
aacgagctattaagcagtcgaaggattgttcttaatggaattgtgaacggcattgatgtt
acggaatgggattcgtcttcagatgagcacatcagtttccattattccgctgatgatctc
tccggcaaggctcgatgcaagactgctcttcaacaggaactaggccttccaattaggcct
gaatgccccttgattggatttatagggagactggactatcagaaaggcattgacctaatc
cgttgggcgattcccgagcttatggaagacaatgtacaattcgtaatgcttggctctggg
gaccctctctatgaagactggatgagagcagcagagaaaacttacagagataaatttcgc
ggttgggtcggatttaatgttcccatttctcatcggattactgcaggctgtgacatactg
ttgatgccttcaagattcgaaccttgcggattaaatcaattgtatgcaatgagatatggt
actgtaccagtagttcatgccacaggaggacttagagacactgtagagaatttcaatccg
tatgctggagatggtagcggggaaggcacagggtggactttttctccccttacaaaagag
agtatgctggaggcattaagaacagctataatgacataccgagaccacaagtcaacatgg
gaagcattgatgagaagaggtatgcaaagagacttcacctgggaaactgctgccattcat
tacgagcaggttttcgaatgggcttgtatcgatccgccgtatattacttga
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