KEGG   Gossypium hirsutum (upland cotton): 107944187
Entry
107944187         CDS       T04793                                 
Name
(RefSeq) cell division cycle protein 48 homolog
Organism
ghi  Gossypium hirsutum (upland cotton)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 AAA_2 AAA_5 AAA_22 CDC48_2 AAA_14 AAA_33 TIP49 AAA_18 RNA_helicase nSTAND3 AAA_28 Mg_chelatase AAA_17 ATPase_2 Parvo_NS1 IstB_IS21 Viral_helicase1 Zeta_toxin NACHT ABC_tran AAA_7 AAA_24 NB-ARC TsaE DUF815 Vps4_C Bac_DnaA Sigma54_activat ResIII Sigma54_activ_2 Rad17 ATP-synt_ab Zot UFD1 Molydop_binding Rv0078B
Other DBs
NCBI-GeneID: 107944187
NCBI-ProteinID: XP_016733505
UniProt: A0A1U8N3A7
LinkDB
Position
A11:123709111..123714634
AA seq 805 aa
MSNQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVSMHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCSDVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDFFLARGGMRSVEFKVIETDPPEYCV
VAPDTEIFCEGEPVKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKISKETHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFTTALGTSNPSALRETVVEVPNISW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRHQI
FKACLRKSPLAKEVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRREN
PEAMEEDVDDEVAEIKPAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFKFAE
TGSRAATSDPFATTAGGADEDDLYS
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgtcgaaccaagctgaatcttctgattcgaaagggactaagagggattttagtacggcg
atcttggaaagaaagaaggctcccaatcggctcgttgttgatgaggcgatcaacgatgat
aactccgttgtttccatgcatcctgacaccatggaaaagctccagttgtttcgcggtgac
actatcctcatcaagggaaagaagaggaaagatactatctgcattgctctcgcagacgac
acatgtgatgaaccgaagatcaggatgaataaagttgtcaggtcgaacttgagggttagg
ctcggtgatgttgtctctgtgcaccagtgttctgatgttaagtacggaaaacgtgtgcac
atcttgcccgtggatgacactatcgaaggggttactggaaatctttttgacgcctacctt
aaaccttactttcttgaagcataccgcccagtgaggaagggtgatttcttccttgctaga
ggtggaatgagaagcgtagaattcaaggttattgagaccgaccctcccgagtactgtgtg
gttgcacctgacaccgagatattctgcgagggagagcctgtaaagagggaagatgaaaat
agattagacgaggtcggttatgatgatgttggtggagtacgaaaacagatggctcaaatt
cgggaattagtggagcttccgttgaggcatccacaactctttaaatcaattggtgtgaag
ccacctaaaggaattctgctttacggacctcctggatcaggaaagactttgatcgcccgt
gctgttgcaaatgaaaccggtgctttctttttctgcatcaacggtccggaaatcatgtca
aagttggccggagagagtgaaagtaatctccgaaaagcatttgaagaagcagagaagaat
gctccgtccattatatttatagatgaaatcgattcgattgctcccaagcgagaaaaaacg
aatggtgaagtcgagaggaggattgtttctcagcttttgacactaatggatgggcttaaa
tcccgggctcatgttattgttattggggccacaaaccgtcctaatagcatcgatccagct
cttagaaggttcggaagatttgatcgggagattgatattggtgtccccgatgaagttggt
cgccttgaggtgcttcgtatccacacaaagaacatgaagctggctgaagatgttgattta
gaaaaaatttcgaaggaaacccacggctatgttggtgcagatcttgcagctctttgtact
gaggcagcattacaatgcatccgagaaaagatggatgtgattgacctggaagatgattca
atagacgctgagatattaaactctatggcagtcacaaacgaacacttcacgactgctctt
ggaacaagcaatccatcagctctgcgtgaaactgttgttgaagtgcccaatatcagttgg
gaagatattggaggtcttgagaatgttaagagagagcttcaagagacggttcaatatcca
gtggagcatcccgagaagtttgagaagtttgggatgtcaccgtcgaagggagtgctattc
tacggccctcctggatgtgggaaaacccttctggccaaagctatcgcaaacgaatgtcag
gcaaacttcattagcgtcaagggtccggaattgctcacaatgtggttcggagaaagtgag
gccaatgttcgtgaaattttcgataaggctcgccagtctgctccttgtgtccttttcttt
gatgaacttgactcaattgctactcagagaggaagcagtgtcggagatgcaggtggtgcc
gccgatagggttctgaaccaacttcttaccgagatggatggcatgtctgccaagaaaact
gttttcatcatcggagccaccaaccgaccagacattatagatcccgcacttttgcggcca
ggtcgtctcgatcagttaatctatattcccctccccgacgaggaatctcgtcatcaaatc
tttaaggcttgcttgaggaagtcaccacttgcaaaagaagtcgacctccgtgctcttgcc
aaatatactcaaggctttagcggtgctgatattaccgaaatttgccaacgtgcatgtaaa
tatgccatcagagaaaacattgagaaggacattgagagagaacggagaagaagggagaac
cccgaagctatggaagaagatgttgatgacgaagtggcagagatcaagccggcgcatttc
gaggaatcgatgaagtttgctcggaggagtgtgagtgatgctgatatccgaaagtaccaa
gcattcgcacaaacgttgcagcaatcgagggggtttggaagcgaattcaagtttgcagaa
accggttccagggctgcaacatctgatccttttgcaactacagcaggtggagctgatgaa
gatgatctttacagttaa

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