Gossypium hirsutum (upland cotton): 107944187
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Entry
107944187 CDS
T04793
Name
(RefSeq) cell division cycle protein 48 homolog
Organism
ghi
Gossypium hirsutum (upland cotton)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_22
CDC48_2
AAA_14
AAA_33
TIP49
AAA_18
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
AAA_17
ATPase_2
Parvo_NS1
IstB_IS21
Viral_helicase1
Zeta_toxin
NACHT
ABC_tran
AAA_7
AAA_24
NB-ARC
TsaE
DUF815
Vps4_C
Bac_DnaA
Sigma54_activat
ResIII
Sigma54_activ_2
Rad17
ATP-synt_ab
Zot
UFD1
Molydop_binding
Rv0078B
Motif
Other DBs
NCBI-GeneID:
107944187
NCBI-ProteinID:
XP_016733505
UniProt:
A0A1U8N3A7
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Position
A11:123709111..123714634
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AA seq
805 aa
AA seq
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MSNQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVSMHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCSDVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDFFLARGGMRSVEFKVIETDPPEYCV
VAPDTEIFCEGEPVKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKISKETHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFTTALGTSNPSALRETVVEVPNISW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRHQI
FKACLRKSPLAKEVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRREN
PEAMEEDVDDEVAEIKPAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFKFAE
TGSRAATSDPFATTAGGADEDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaagctgaatcttctgattcgaaagggactaagagggattttagtacggcg
atcttggaaagaaagaaggctcccaatcggctcgttgttgatgaggcgatcaacgatgat
aactccgttgtttccatgcatcctgacaccatggaaaagctccagttgtttcgcggtgac
actatcctcatcaagggaaagaagaggaaagatactatctgcattgctctcgcagacgac
acatgtgatgaaccgaagatcaggatgaataaagttgtcaggtcgaacttgagggttagg
ctcggtgatgttgtctctgtgcaccagtgttctgatgttaagtacggaaaacgtgtgcac
atcttgcccgtggatgacactatcgaaggggttactggaaatctttttgacgcctacctt
aaaccttactttcttgaagcataccgcccagtgaggaagggtgatttcttccttgctaga
ggtggaatgagaagcgtagaattcaaggttattgagaccgaccctcccgagtactgtgtg
gttgcacctgacaccgagatattctgcgagggagagcctgtaaagagggaagatgaaaat
agattagacgaggtcggttatgatgatgttggtggagtacgaaaacagatggctcaaatt
cgggaattagtggagcttccgttgaggcatccacaactctttaaatcaattggtgtgaag
ccacctaaaggaattctgctttacggacctcctggatcaggaaagactttgatcgcccgt
gctgttgcaaatgaaaccggtgctttctttttctgcatcaacggtccggaaatcatgtca
aagttggccggagagagtgaaagtaatctccgaaaagcatttgaagaagcagagaagaat
gctccgtccattatatttatagatgaaatcgattcgattgctcccaagcgagaaaaaacg
aatggtgaagtcgagaggaggattgtttctcagcttttgacactaatggatgggcttaaa
tcccgggctcatgttattgttattggggccacaaaccgtcctaatagcatcgatccagct
cttagaaggttcggaagatttgatcgggagattgatattggtgtccccgatgaagttggt
cgccttgaggtgcttcgtatccacacaaagaacatgaagctggctgaagatgttgattta
gaaaaaatttcgaaggaaacccacggctatgttggtgcagatcttgcagctctttgtact
gaggcagcattacaatgcatccgagaaaagatggatgtgattgacctggaagatgattca
atagacgctgagatattaaactctatggcagtcacaaacgaacacttcacgactgctctt
ggaacaagcaatccatcagctctgcgtgaaactgttgttgaagtgcccaatatcagttgg
gaagatattggaggtcttgagaatgttaagagagagcttcaagagacggttcaatatcca
gtggagcatcccgagaagtttgagaagtttgggatgtcaccgtcgaagggagtgctattc
tacggccctcctggatgtgggaaaacccttctggccaaagctatcgcaaacgaatgtcag
gcaaacttcattagcgtcaagggtccggaattgctcacaatgtggttcggagaaagtgag
gccaatgttcgtgaaattttcgataaggctcgccagtctgctccttgtgtccttttcttt
gatgaacttgactcaattgctactcagagaggaagcagtgtcggagatgcaggtggtgcc
gccgatagggttctgaaccaacttcttaccgagatggatggcatgtctgccaagaaaact
gttttcatcatcggagccaccaaccgaccagacattatagatcccgcacttttgcggcca
ggtcgtctcgatcagttaatctatattcccctccccgacgaggaatctcgtcatcaaatc
tttaaggcttgcttgaggaagtcaccacttgcaaaagaagtcgacctccgtgctcttgcc
aaatatactcaaggctttagcggtgctgatattaccgaaatttgccaacgtgcatgtaaa
tatgccatcagagaaaacattgagaaggacattgagagagaacggagaagaagggagaac
cccgaagctatggaagaagatgttgatgacgaagtggcagagatcaagccggcgcatttc
gaggaatcgatgaagtttgctcggaggagtgtgagtgatgctgatatccgaaagtaccaa
gcattcgcacaaacgttgcagcaatcgagggggtttggaagcgaattcaagtttgcagaa
accggttccagggctgcaacatctgatccttttgcaactacagcaggtggagctgatgaa
gatgatctttacagttaa
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