Gossypium hirsutum (upland cotton): 107958035
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Entry
107958035 CDS
T04793
Name
(RefSeq) mRNA-capping enzyme-like
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107958035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107958035
Enzymes [BR:
ghi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
107958035
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
107958035
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
107958035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
DNA_ligase_A_M
Y_phosphatase2
Y_phosphatase
Y_phosphatase3
YafO_toxin
Mitoc_L55
F_actin_bind
Motif
Other DBs
NCBI-GeneID:
107958035
NCBI-ProteinID:
XP_016749177
UniProt:
A0A1U8PDA3
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Position
A01:119037686..119045562
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AA seq
681 aa
AA seq
DB search
MIVGMDLNAFPLPEDDEDPYETQIEHYSAPEEHVESAVEISRREREERRKRLRSDRPDDR
PVHISQPVVYDHFYQNRNSTFYDKSRIPPGWLDCPAVGKEIGCIIPSKVPLGESYNDCVP
PGKRYSFKQAVHKQEVLGRKLGLVIDLTNTSRYYQTTDLKKKGIKHVKIQCRGRDAVPEN
ASVNTFVYEVSQFLLRQKSNKYILVHCTHGHNRTGYMIIHYLMRTQPMSVTQAIKFFSEA
RPPGIYKPDYIDALYAFYHERRPESLVCPPTPEWKRSSDLDLNGEAAADDDDDDGAPTAL
PENHETDVMLTNDDVLGDEIPHDQQVQMRQFCYQQLKLNTGVRGHAQFPGSHPVSLNRDN
LQLLRQRYYYATWKADGTRYMMLITIDGCYLIDRSFNIRRVQMRFPCWHNKGVGGMNHHL
TLLDGEMIIDTLPDSRKQERRYLIYDMMVLNNEPIIERPFYERWKMLEKEVIEPRNYERH
NIYQSRNPYYRFDLEPFRVRRKDFWLLSTVNKVLKEFIPKLSHEADGLIFQGWDDPYVPR
THEGLLKWKYAQLNSVDFLFEIGSDDHEQLFLHERGRKKLMEGNTAEFREVSDPPSSFSG
KIIECSWDPDRQVWVYMRIRTDKSTPNDINTYRKVMQSINDNITEEILLNEINEIIRLPI
YADRIRMDSKAHLHTNSARRR
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgattgttggtatggacctaaatgctttcccattacctgaagatgatgaagatccatat
gaaacacagatagaacattactctgctccagaagagcatgtagaatctgcagttgaaatt
tcacggcgggaacgcgaagagagacggaagagattgagaagtgaccgaccagatgaccgg
ccagtacatatctctcagcctgttgtatatgatcacttctatcaaaataggaactcaaca
ttttatgataaaagcaggatccctcctggttggttggattgtcctgcggttggtaaggaa
ataggctgcatcattccttcgaaggttccacttggtgaatcttataatgactgtgttcct
cctggtaaaagatactcttttaaacaagcggttcataagcaagaagttttaggaagaaag
cttggtttggtgattgatttgacgaacacttctcgttactatcaaactacagacctgaag
aaaaaaggcattaagcatgtaaagatacaatgtaggggaagggatgctgtacctgagaat
gcgtctgtaaatacctttgtttatgaggtgtcacaatttctcctacgtcagaaatcgaat
aaatatattcttgtccattgtactcatggtcataaccgcactggctacatgattattcac
tatctcatgcgaacacagccaatgtctgttactcaggcaataaaatttttttctgaggca
cgcccaccaggaatatataaaccagactatattgatgccctgtatgcattttatcatgaa
agaagaccagaatctcttgtctgccctccaactcctgagtggaaaagatcttctgatctt
gatctcaacggtgaagcagctgcagatgatgatgatgatgatggagctccaactgcatta
cctgagaatcatgaaactgatgtaatgttgacaaatgatgacgttttgggtgatgaaata
cctcatgaccagcaggtacaaatgaggcaattctgctatcaacaattgaagttaaatact
ggggttagagggcatgcacaattcccgggatcacatccagtttcgctgaacagggacaat
ttacaacttttaaggcaacgctattattatgccacttggaaagcagatggaacacgatat
atgatgttaataactattgatggatgttacttaattgatagaagttttaatatccgaagg
gttcagatgaggtttccatgctggcacaataaaggtgtaggtggcatgaatcatcatttg
acattgcttgatggggaaatgataattgacaccctgccagactcacggaagcaagagaga
agatatctcatctatgatatgatggttcttaacaatgaacctattatagagcggccattc
tatgaacgatggaaaatgctggaaaaagaagtgattgagcctcgaaattatgaacgccac
aatatttaccagagcaggaatccttattaccgatttgaccttgaacccttcagggtgcgg
aggaaggacttttggttgctttctactgtaaataaggttttgaaagagtttatccccaag
ctctctcacgaggcagatggtcttatttttcagggttgggatgatccttatgtacctcgc
actcatgaaggtcttttgaagtggaaatatgctcagttgaactctgttgactttctattt
gagattggaagcgatgatcatgaacaactttttctccatgaacggggaagaaagaagttg
atggaagggaatactgcagaattcagagaggtttcagatcctccttcatcgttctctggg
aagattatcgagtgttcttgggatcctgatcgacaagtgtgggtctatatgaggatcagg
acagataagtcgactcccaatgatattaatacttacaggaaggttatgcaaagtataaac
gacaatatcacagaagaaatcttattaaacgagatcaacgagatcattcgcttgcccatt
tatgctgatagaataaggatggacagcaaggcccacctgcatacaaattcagcacgacgg
aggtga
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