KEGG   Gossypium hirsutum (upland cotton): 107962939
Entry
107962939         CDS       T04793                                 
Name
(RefSeq) tubulin alpha-5 chain
  KO
K07374  tubulin alpha
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04145  Phagosome
ghi04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107962939
  09142 Cell motility
   04814 Motor proteins
    107962939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107962939
   03036 Chromosome and associated proteins [BR:ghi03036]
    107962939
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ghi04812]
    107962939
   04147 Exosome [BR:ghi04147]
    107962939
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107962939
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     107962939
Cytoskeleton proteins [BR:ghi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    107962939
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107962939
  Exosomal proteins of other body fluids (saliva and urine)
   107962939
  Exosomal proteins of colorectal cancer cells
   107962939
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 107962939
NCBI-ProteinID: XP_016755000
UniProt: A0A1U8PV27
LinkDB
Position
A11:complement(119401584..119405602)
AA seq 450 aa
MREVISVHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSEGNAGGNHDAFSTFFSETGSGK
YVPRALFIDLEPTVMDEVRAGTYRQLFHPQQLISGKEDAANNFARGHYTAGRDIVEVCLD
RVRKLADNCTGLQGFLMFNAVGGGTGSGLGSLLLERLSVEYGKKPKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYKNLNRLISQIISSLTS
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISVAKAYHENLSVAQITSGVFEPGS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVRNIKTRRAVQFVDWCPTGFKCGINYQPP
TVVPGGDLAEVRRAVCMISNNTAVAEVFARIDHKFDLMYAKRAFVHWYIGEGMEEGEFSE
AREDLAALEKDYEEVGAEGPEDDEEPLEDY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagggaggtgattagtgttcatataggacaagctggaattcaggttgggaattcatgt
tgggagctttactgccttgaacatggcattcagcctgatgggatgatgcctagtgagggc
aatgcaggtggtaaccatgatgccttcagcaccttctttagcgagactggatccggaaaa
tacgtgccgagagctttattcatcgacctagagccgaccgtcatggacgaagttcgggct
gggacttaccggcaactgttccatccgcaacaacttatttccggcaaggaagatgctgct
aataactttgctagaggacactatacagctggtagggacattgtggaagtttgccttgac
cgagttagaaaattggctgataactgcactggattgcaagggtttttgatgtttaatgcc
gtgggcggtggaactggttccggtttaggctcgctgcttttggagcgcttgtcggttgaa
tatgggaaaaagcctaaacttggcttcactatctatccttctcctcaggtttctacagca
gttgttgaaccttacaatagtgttctctcaactcattctctccttgaacacacagatgtt
gtggtgcttctcgacaacgaagctatatacgatatctgtaggcgatcgttagacattgaa
aggccgacttacaagaacttgaaccgcttaatatcacaaatcatttcgtctttgacgtct
tcgttgaggtttgatggtgccataaacgttgacattactgagtttcagacgaacctcgtg
ccatatcctcgtatccatttcatgctctcctcatatgccccggtgatctcggttgcaaag
gcttaccacgaaaacctatcggttgcccagattaccagtggtgtttttgaaccgggaagc
atgatggctaaatgtgatccgaggcacggaaaatacatggcgtgctgtttgatgtaccgc
ggagatgtcgtaccaaaggacgtaaatgctgctgttcgtaacattaaaactaggcgggcg
gttcagtttgtagactggtgccctactggtttcaagtgtggcatcaactatcagccacca
acggtggtacccgggggtgatctcgctgaggtaagacgtgcggtgtgtatgatcagcaat
aacacagcggtggcagaggttttcgcccgaattgatcataagtttgatctcatgtatgca
aagagagctttcgttcattggtacataggtgaaggaatggaggaaggtgaattctccgaa
gctcgtgaagatctcgccgctctcgagaaagattatgaagaagtcggagcagaaggtccc
gaagatgatgaagaaccactggaagattactag

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