Guyparkeria halophila: GM160_06685
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Entry
GM160_06685 CDS
T06369
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ghl
Guyparkeria halophila
Brite
KEGG Orthology (KO) [BR:
ghl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghl03016
]
GM160_06685 (truD)
Enzymes [BR:
ghl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GM160_06685 (truD)
Transfer RNA biogenesis [BR:
ghl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GM160_06685 (truD)
Prokaryotic type
GM160_06685 (truD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
DUF3301
Motif
Other DBs
NCBI-ProteinID:
QGT78608
UniProt:
A0A6I6D129
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All DBs
Position
complement(1479339..1480478)
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AA seq
379 aa
AA seq
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MSEVDGAGHPDVQPPLDWPGAPGSARPRLAGSPAWQAGLKQSPESFRVDEELGFDPSGAG
NHWLMRLEKRDMTTGALVDWIAKVTGTRARDIGFSGLKDRHAVTTQWLSVPHESFDPAAF
ERACAEAGVGLLALDRHDRKLRRGTHRANRFRLRLHDVAPVHETEAPDLAGYLAERAPGL
ASRGMANYFGEQRYGRYFGNLRGLVEWGQGIRTGRPKRQARNWLLSTLRSAIFDRVLADR
VASGGIDRVEPGDLLQLAGSRSRFLAEADELDVLEARLAQGDVMPTGPLWGEGASPAGDG
VAARENALATEMLARFGEATWRQWLSDWRVEADRRPLAVRVTDLEYGVEDGAVELAFSLP
PGSYATELVAELFTVTSSD
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggtcgacggcgccggccacccggatgtgcagccgccgctggactggcccggg
gcgccgggctctgcgcgaccacggcttgcgggttcacccgcctggcaggccgggctcaag
cagagcccggagtccttccgcgtggacgaggaactcggctttgaccccagcggggcgggc
aaccactggctgatgcgcctggaaaagcgcgacatgaccaccggcgcgctggtcgactgg
atcgccaaggtgaccggcacgcgggcccgcgacatcggtttttcggggctcaaggatcgc
cacgcggtcaccacccagtggctgagcgttccgcacgaatccttcgatccggcggccttc
gaacgggcctgcgcggaggcgggcgtcggcctgctggcgctcgatcgccatgatcgaaaa
ctgcgccgtggcacccaccgcgccaatcgattccgcttgcgcctgcacgacgtcgcgccc
gtccacgagaccgaggcgcccgacctggcggggtacctggccgaacgggccccgggtctc
gcctcgcgcggcatggccaactacttcggcgaacagcgctacgggcggtatttcggcaac
ctgcgcggcctggtcgagtggggccagggcatccggacggggcgccccaagcgccaggcg
cgcaactggttgctgtccacgctgcgctcggcgatcttcgaccgcgtgctggccgaccgg
gttgccagcggtggcatcgaccgggtcgagcccggtgacctgctgcaactggccggttcg
cgcagccgtttcctcgccgaggccgacgagctcgacgtgctcgaggcgcggctggcgcag
ggcgacgtcatgcccaccggcccgttgtggggcgagggtgcctccccggcgggtgatggg
gtggcggcccgcgagaatgccctggccaccgagatgctggcccggttcggcgaggcgacc
tggcggcaatggctgagcgattggcgggtggaggccgaccgtcgtccactggccgtacgc
gtaaccgacctcgagtacggggtcgaggacggcgcggtcgaactcgcgttttccctgccg
ccgggcagctacgccaccgaactggtcgccgagcttttcaccgtgacgtcgtccgattga
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