Gimesia benthica: F1728_11875
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Entry
F1728_11875 CDS
T06296
Name
(GenBank) diguanylate cyclase
Organism
gim
Gimesia benthica
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
HD_5
PAS_9
HD
PAS_4
PAS
PAS_3
HDOD
PAS_10
Motif
Other DBs
NCBI-ProteinID:
QGQ23326
UniProt:
A0A6I6ABG7
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Position
3159877..3162021
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AA seq
714 aa
AA seq
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MNSSLIANSQTVPQQQSVHGSYHMGSSQILRELVAFSAESDELALNTQHTDDVDQVICRK
HLRKLLTALQARDAVTLGHCRRVAFLAKGIANNLGWEGIHLKRLEVAALLHDIGKIGVPD
HIIFKPGKLTSDEIELMSHYHHIGLDVLQACRTDHEVLTILSQTRFHFSGATNGYQCIGS
EVHQGARILAIADAYDSLATDQVYRTGKKHEEIMSILMGAAGTQFDGNIICALSRWEQTE
RETFHEAIQEVNRNFQPKPLNEREIVEANLISNIFSYLFQIESLYDGFYIVNSDFQFVLF
SPGLEQLTNLRSGDMLGNSWTNHSVPVTNQDGTMLASSEHTMNRVIASGKSMTTELMLKR
PDGRLIQIEVQSVPMFGEDGRLVGVAEIFRDLSRSLKRPQEFNQLKMAASQDALTSVANR
GELETQLAIMLNQASQNQNTAPLSIIFIDADHFKNINDTYGHAVGDEVLIELARLFQHET
YSGELVGRYGGEEFVILCPETDLEHARQKAERLRLAVNNLKLENLNNNRITASFGVAQLE
PGDSLESLFHRADNALYQAKETGRNRVCSLTCEEQMSGAVPEAVAPDQSNAGKMVFESSF
SALISSDIVVYKLGGFVNDNDAHLTEVNPNRAVMRLGKAGLLPFWGKTDDRRPIEVELVF
DNATRKSTSGSRNATPRVEVMIRMTPLGWIKQPEVFQKRAARVFRLLKDYFVAD
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaatagttccctgatagccaacagtcaaaccgtgccacagcagcagtctgtgcatggc
agctatcatatgggctcttcacagatcctgagggaactggttgcattctcggccgaatcc
gacgaactggcactcaatacacaacatacggacgacgtcgatcaggtcatctgtcgtaaa
cacctgcgcaaactgttgactgcgctacaggcacgtgatgctgtcacactcggtcactgc
cgacgtgtcgctttcctggccaaagggattgccaacaatctgggctgggaaggtatccac
ctgaaacgcctggaagtagccgcactgctgcacgatattggtaaaatcggcgtccccgac
cacatcattttcaagccgggtaagctgacatcagatgaaatcgaactgatgtcgcattac
caccacatcggtctcgatgtgttacaggcctgtcgcaccgaccatgaagtgttgactatc
ctctcgcaaacccgttttcacttcagcggggcgaccaatggatatcaatgcatcggcagt
gaagttcatcagggggcacgcatcctggcgatcgctgacgcctatgattcactggccacc
gatcaggtctatcggaccgggaagaaacacgaagagatcatgtcgatcctgatgggggcc
gcaggcactcagttcgatggcaacatcatctgtgccctgtcccgctgggaacagaccgaa
cgggaaaccttccacgaagccattcaagaggtcaaccgaaactttcagccgaagccactg
aatgagcgggagatagtggaagcgaatctgatcagtaatattttctcctacctgtttcaa
atcgaaagtctttatgatggtttttatatcgtcaactcggattttcagtttgtgctattc
agccctggtctggaacaactgactaacctgcgatccggcgacatgctgggcaactcctgg
accaatcacagcgtcccggtgacgaatcaggatggaacgatgctcgcctcatccgagcac
accatgaaccgggtcatcgccagtggaaaatcaatgaccacggaactaatgctgaaacga
ccggacggccggctgattcagatcgaagttcaatccgtccccatgttcggggaagatggt
cgtctggttggcgtagcggagatcttccgtgatctgtcacggagcctgaagcgtccccag
gaatttaaccagctgaaaatggctgccagccaggatgcactgacgtccgttgccaaccgg
ggagaactggaaactcagctggcaatcatgttgaaccaggccagccagaaccagaacaca
gcccctttaagcattatcttcatcgacgccgatcactttaaaaacatcaacgacacttat
ggccatgcggttggcgatgaagtgctcattgaactggcccgactgtttcagcatgaaacc
tattccggagaactggtggggcgttacgggggtgaagagtttgtcattctctgcccggaa
accgacctggaacatgcacggcaaaaagcagaacgcctgcgactggcagtgaataatctg
aaactggaaaatttaaacaataaccgcatcactgcctcgtttggtgtcgcgcagctggag
ccgggtgactccctggaaagcctgttccatcgtgccgacaatgccctctaccaggcgaaa
gaaacaggacgtaatcgggtctgttccttgacctgtgaagaacagatgtcgggcgcggtt
cctgaagccgtcgctcccgaccaatccaatgcaggcaaaatggtcttcgagagctccttc
agcgctctcatctcatcagatattgttgtttacaagctcggaggcttcgtcaatgacaat
gatgcacacctcactgaagtcaatccgaatcgagctgtcatgcgtctgggcaaagccggg
ctacttcccttctggggaaaaacggatgaccgccgccctatcgaggtggaactggtcttt
gataatgccacccggaaatccacttccggctcacgaaatgcgacaccccgcgtggaagtc
atgatcagaatgactcccctgggctggatcaaacagcctgaagtcttccagaaacgggcc
gctcgtgtctttcgtctgctgaaagattatttcgtcgctgactga
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