KEGG   Gordonia iterans: C6V83_12355
Entry
C6V83_12355       CDS       T05370                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
git  Gordonia iterans
Pathway
git03030  DNA replication
git03410  Base excision repair
git03420  Nucleotide excision repair
git03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:git00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C6V83_12355 (polA)
   03410 Base excision repair
    C6V83_12355 (polA)
   03420 Nucleotide excision repair
    C6V83_12355 (polA)
   03440 Homologous recombination
    C6V83_12355 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:git03032]
    C6V83_12355 (polA)
   03400 DNA repair and recombination proteins [BR:git03400]
    C6V83_12355 (polA)
Enzymes [BR:git01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C6V83_12355 (polA)
DNA replication proteins [BR:git03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     C6V83_12355 (polA)
DNA repair and recombination proteins [BR:git03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     C6V83_12355 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C6V83_12355 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 HHH_2 DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: AVM02217
UniProt: A0A2S0KKK6
LinkDB
Position
complement(2693770..2696616)
AA seq 948 aa
MSPAKTSSSTSTRSKPAARPTLMLLDGHSLAYRAFFALPAENFQTNTGQATNAVYGFTSM
LINLLRDEDPTHIAAAFDVSRQTFRSEMFPEYKAQRSKSPDEFRGQVDLTKDVLDAMGIP
VIAIEGYEADDVIATLATRADAEGYRVLVVTGDRDSLQLVNENITVLYPKRGVSELTRFT
PEEVEKKYGLTPAQYPDYAALRGDPSDNLPGIPGVGEKTAAKWIREYGSFEELVDRADEV
RGKVGDSLRENLAAVIMNRRLTELVRDMDLPTGPDDLALHGWDRDRIHRLFDDLEFKVLR
DRLFSTLTSVEPEADSGFEVSGTRLGTGEVRAWLDDHARSGRSGLAVTGPQRVFGSEAVG
IAVAAADGEAAFVDPVTLSPDDDAALGEWLAAEDRPKAVHEVKWAIHALRGRGWTLAGVT
SDTALAAYLVRPGQRTFNLDDLALRYLRRELKADTAGDDGQLSLLDGEEDESAVSNQLML
SAQAVAELADTLDVELERIDSVALLRDMELPLAFVLAGLEAAGIAVDLDHLEGLEREFAQ
RVRDAAESAYEVIGEQVNLGSPKQLQVVLFDKLGMPKTKKTKTGYTTDADALASLYEKTE
HPFLKFLLEHRDATRLKVTVDGLLKSVADDQRIHTTFNQTVAATGRLSSTEPNLQNIPVR
TDAGRQIRGGFVVGSASSPGGTASSLVEPVETATSPGGTAPSPGGTAPSLVEPVETYECL
MTADYSQIEMRIMAHLSGDEGLIEAFNSGEDLHNFVGSRAFGVPIDQVDAQLRHRVKAMS
YGLAYGLSAFGLAAQLGISRDEARDQMDQYFARFGGVRDYLHEVVVEARRKEYTETMFGR
RRYLPDLNSDNFQRRQAAERMALNAPIQGTAADIIKVAMIKVAERIEREELASRMLLQVH
DELVVEVASGERERIEAVVREEMGSAIELSVPLDVSVGFGRSWDDAAH
NT seq 2847 nt   +upstreamnt  +downstreamnt
gtgagccccgcgaagacatcgtccagcacttccacccgcagcaagccggccgccagaccg
acgctgatgctgctcgacggccattcgctggcctaccgggcgttcttcgcgctgccggcc
gagaacttccagaccaacaccgggcaggcgaccaacgccgtctacggattcacctcgatg
ctgatcaacttgctgcgcgacgaggacccgacgcacatcgcggcggcgttcgacgtctcc
cgccagaccttccgctcggagatgttccccgagtacaaggcgcagcggtccaagtcaccg
gacgagttccgcggccaggtcgatctgaccaaggacgtgctcgacgcgatgggcatcccg
gtgatcgccatcgaaggctacgaggccgacgacgtgatcgccaccctcgccacgcgcgcg
gacgccgagggctatcgggtcctcgtagtcaccggcgaccgcgactcgctgcagctggtc
aacgagaacatcaccgtgctgtaccccaagcgcggcgtctccgagctcacccggttcacg
ccggaggaggtcgagaagaagtacggcctcaccccggcccagtatccggactacgcggct
ttgcgcggcgatcccagtgacaacctccccggcatcccgggcgtgggggagaagaccgcg
gccaagtggatccgcgagtacggctcgttcgaggaactggtcgaccgcgctgacgaggtg
cgcgggaaggtcggtgattcgctgcgcgagaacctcgccgccgtcatcatgaaccgtcgc
ctgaccgagttggtccgggacatggacctgccgaccggaccggacgacctcgccctgcac
ggctgggaccgcgaccgcatccaccgattgttcgacgatctcgaattcaaggtgctgcgc
gaccgtttgttctccacgctcacctccgtggagcccgaagcggactccggattcgaggtc
agcggcacccggctcggaaccggcgaggtccgcgcctggctcgacgaccacgctcgctcg
ggccgcagcggcctggcggtgaccgggccccagcgcgtcttcggttcggaggccgtcggg
atcgccgtcgcggccgccgacggggaggccgccttcgtcgatccggtcaccctgagcccc
gacgacgacgccgcgctgggcgagtggctcgccgccgaggaccggcccaaggcggtccac
gaggtcaagtgggcgatccacgcgctgcgcggccgggggtggacgctggccggtgtcacc
tcggacaccgcgctggcggcgtatctggtccgtcctggacagcgcacgttcaacctcgac
gacctcgccctgcgttacctgcgccgggagctgaaggccgacaccgcaggcgacgacggc
cagctgtcgctgctcgacggcgaggaggacgaaagcgcggtgagcaaccagctgatgctg
tccgcgcaggctgtggccgaactcgccgacaccctcgacgtcgagttggagcggatcgac
tcggtggcgctgctgcgggacatggagcttccgctggcgttcgtcctggcgggcctcgag
gcggcgggcatcgccgtggacctcgatcacctggagggactcgagcgcgagttcgcgcag
cgggtgcgcgatgccgcggagtcggcgtacgaggtgatcggcgagcaggtgaacctcggc
tcgccgaagcagctgcaggtggtgctgttcgacaagctcggcatgccgaagaccaagaag
acaaaaaccgggtacaccacggacgcggacgcgctcgcgtcgctgtacgagaagaccgag
caccccttcctgaagttcctgctggaacaccgggacgcgacccgcctgaaggtcaccgtc
gacggtctgctcaagtcggtcgccgacgatcagcgcatccacaccaccttcaaccagacg
gtggcggcgaccggacggctctcgtccaccgaaccgaatctgcagaacatcccggtccgg
accgacgcaggtcggcagatccgcggcggcttcgtcgtcggctccgcctcgtcgccgggt
gggactgcctcgtcgctggttgagcctgtcgaaaccgccacttcgccgggcgggactgcc
ccttcgccgggtgggactgccccttcgctggttgagcctgtcgaaacctacgagtgcctg
atgaccgcggactactcacagatcgagatgcggatcatggcgcacctgtcgggtgacgag
gggctgatcgaggccttcaactcgggcgaagacctgcacaacttcgtcggctcccgggcg
ttcggcgtgccgatcgatcaggtcgacgcgcagctgcggcaccgggtcaaggcgatgtcg
tacggtctcgcgtacgggttgagcgccttcggtctggcggcccagctcggcatcagccgt
gacgaggcccgcgatcagatggaccagtacttcgcacgcttcggcggcgtccgggactac
cttcacgaggtggtggtggaggctcgccgcaaggagtacaccgagaccatgttcggccgg
cgccgatatctgcccgacctgaactccgacaatttccagcgccgccaggccgccgaacgg
atggcgctcaacgcgccgattcagggcaccgccgccgacatcatcaaggtcgccatgatc
aaggtggccgagcgcatcgagcgcgaagagctcgcgtcgcggatgctgctccaggtgcac
gacgagctcgtcgtcgaggtggcgtccggcgagcgcgagcggatcgaggcggtggtccgc
gaagagatgggttcggcgatcgagttgtccgtgccgctggacgtgtcggtgggcttcggc
cgttcctgggacgatgcggcgcactga

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