KEGG   Gekko japonicus: 107109900Help
Entry
107109900         CDS       T04299                                 

Gene name
SDHC
Definition
(RefSeq) succinate dehydrogenase complex subunit C
  KO
K00236  succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
Organism
gja  Gekko japonicus
Pathway
gja00020  Citrate cycle (TCA cycle)
gja00190  Oxidative phosphorylation
gja01100  Metabolic pathways
gja01200  Carbon metabolism
Module
gja_M00009  Citrate cycle (TCA cycle, Krebs cycle)
gja_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gja_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:gja00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    107109900 (SDHC)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    107109900 (SDHC)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Sdh_cyt
Motif
Other DBs
NCBI-GeneID: 107109900
NCBI-ProteinID: XP_015266094
LinkDB All DBs
Position
Un
AA seq 109 aa AA seqDB search
WSLPMAMSIIHRGTGVAMSLGVSLFGLSALILPGQFPDYLDFVRSLNVPAALIYSGKFAL
AFPLTYHTWNGIRHLAWDMGKGFKIPQVYQSGVLVLVLTVLSSIGIAAM
NT seq 331 nt NT seq  +upstreamnt  +downstreamnt
ttggtctctgcctatggcgatgtccatcatccaccgtgggactggggtcgcaatgagtct
aggggtgtctctctttggcttgagtgccctcattcttccaggccaatttcctgactatct
ggactttgtcaggtcccttaacgtgccagcggctctcatctactcggggaagtttgccct
ggctttccccttgacctaccacacctggaacgggatccggcacctggcttgggacatggg
caaaggattcaagatcccccaggtctaccagtccggcgtcttggttctggtgctgacggt
tttgtcttccatcgggattgcggcaatgtga

KEGG   Gekko japonicus: 107111390Help
Entry
107111390         CDS       T04299                                 

Gene name
SDHB
Definition
(RefSeq) succinate dehydrogenase complex iron sulfur subunit B
  KO
K00235  succinate dehydrogenase (ubiquinone) iron-sulfur subunit [EC:1.3.5.1]
Organism
gja  Gekko japonicus
Pathway
gja00020  Citrate cycle (TCA cycle)
gja00190  Oxidative phosphorylation
gja01100  Metabolic pathways
gja01200  Carbon metabolism
Module
gja_M00009  Citrate cycle (TCA cycle, Krebs cycle)
gja_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gja_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:gja00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    107111390 (SDHB)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    107111390 (SDHB)
Enzymes [BR:gja01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     107111390 (SDHB)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Fer2_3 Fer4_17 Fer4_8 Fer4_10 Fer4_9 Fer2 Fer4_18 Fer4_7
Motif
Other DBs
NCBI-GeneID: 107111390
NCBI-ProteinID: XP_015267842
LinkDB All DBs
Position
Un
AA seq 288 aa AA seqDB search
MAAAVTVGRAGFVSFRGGPLGVAVQACRGAHAAAAAAPLATEASPRIKKFAIYRWNPDSP
GEKPRMQTYEVDLNRCGPMVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLA
CTRRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKAIQPYLKKKDESKQGKEQYLQ
SIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLA
QLEDPFSLYRCHTIMNCTKACPKGLNPGKAIAEIKKMMATYKEKAARA
NT seq 867 nt NT seq  +upstreamnt  +downstreamnt
atggcggccgccgtgaccgtggggagggcgggattcgtgtccttcagaggcggccctctg
ggagtggcggtccaggcctgtcgcggagcacatgcagcggccgcagctgcccccctcgcc
acggaggcatccccgcgcatcaagaagtttgccatctaccggtggaacccagacagccct
ggagagaagccccgcatgcagacctacgaggtggacctgaacagatgcgggcctatggtt
ctcgatgccttaatcaaaataaaaaatgagatggactccacactgacgttccgccggtcc
tgccgggaaggcatttgcggctcctgcgccatgaatatcaacggggggaacaccttggcc
tgcaccaggaggatcgacacgaacctcagcaaggtctccaaaatctaccctctcccccac
atgtacgtggtgaaggacctcgtcccggatttgagcaacttctatgcccagtacaaagcg
atccagccttatttgaaaaagaaggacgagtccaagcagggcaaagagcaatacctccag
tccatagaagagcgtgaaaagctggacgggctgtacgaatgcatcctgtgtgcctgctgc
agcaccagctgccccagttactggtggaacggagacaagtacctgggccctgccgtgctc
atgcaggcctaccgctggatgatcgactcccgggacgactacacagaagagcggctggcg
cagctggaagaccccttctccctttaccgctgccacaccatcatgaactgtaccaaggcc
tgccccaaggggctgaaccccggaaaagccattgctgaaatcaagaagatgatggccacc
tacaaggagaaggcagccagagcttaa

KEGG   Gekko japonicus: 107116139Help
Entry
107116139         CDS       T04299                                 

Gene name
SDHD
Definition
(RefSeq) succinate dehydrogenase complex subunit D
  KO
K00237  succinate dehydrogenase (ubiquinone) membrane anchor subunit
Organism
gja  Gekko japonicus
Pathway
gja00020  Citrate cycle (TCA cycle)
gja00190  Oxidative phosphorylation
gja01100  Metabolic pathways
gja01200  Carbon metabolism
Module
gja_M00009  Citrate cycle (TCA cycle, Krebs cycle)
gja_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gja_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:gja00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    107116139 (SDHD)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    107116139 (SDHD)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: CybS
Motif
Other DBs
NCBI-GeneID: 107116139
NCBI-ProteinID: XP_015273499
LinkDB All DBs
Position
Un
AA seq 219 aa AA seqDB search
MLLSSSGAGQRPGAEGLSRHRPEAPPGPAEDCSCSQGSPHHHQEFCGTRRLFSFSLLYCL
QCCCPFPARVSLLGLLSSSEAVLLKKALLARSAIVCSASEERHPLACRIHTSPRSLAGSK
AASLHWTAERAVSVFLLGLLPAAYLYPGPAVDYSLAAALTIHGHWGLGQVVTDYVHGETS
FKLASAGLYLLSAVTFAGLCYFNYHDVGICKAVAMLWKL
NT seq 660 nt NT seq  +upstreamnt  +downstreamnt
atgctcctctcctcctccggggctgggcaacggccgggcgcagagggcctctctaggcac
cgaccggaagcgcctcctggcccggccgaagattgcagttgcagccaaggttccccccac
caccaccaagagttctgtggcacccgaaggcttttcagcttctcactgttgtattgtctt
cagtgttgttgcccttttccagcccgggtttctttattgggtctcctttccagttctgag
gcggttctcctgaagaaggctctcctggctagatcagccatcgtctgctcagcatctgag
gaacgccatcctctggcatgcagaatccacacgtcccccaggagtttggcaggttccaag
gcagcctctctgcactggacagccgagcgagcggtcagcgtcttcttgcttgggctcctt
cctgcggcctacctgtaccctggaccggccgtggactactcgctggctgcggctctcacg
atccacggccactggggcctcggccaggttgtaaccgactatgtccacggagagacgtcc
tttaagctagccagcgccggcctctacctgctgtccgccgtcacctttgccggcctctgc
tacttcaactaccacgacgtgggcatctgcaaggctgtggccatgctgtggaaactgtga

KEGG   Gekko japonicus: 107118404Help
Entry
107118404         CDS       T04299                                 

Gene name
SDHA
Definition
(RefSeq) succinate dehydrogenase complex flavoprotein subunit A
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
gja  Gekko japonicus
Pathway
gja00020  Citrate cycle (TCA cycle)
gja00190  Oxidative phosphorylation
gja01100  Metabolic pathways
gja01200  Carbon metabolism
Module
gja_M00009  Citrate cycle (TCA cycle, Krebs cycle)
gja_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gja_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:gja00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    107118404 (SDHA)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    107118404 (SDHA)
Enzymes [BR:gja01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     107118404 (SDHA)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 Thi4 GIDA FAD_binding_3 DAO
Motif
Other DBs
NCBI-GeneID: 107118404
NCBI-ProteinID: XP_015276221
LinkDB All DBs
Position
Un
AA seq 641 aa AA seqDB search
MAAAAVRGWRRPLRAFRWPGPAACQAFSRQFHFTVYGKKSASAKVSDSISTQYPVVDHEF
DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWH
FYDTVKGSDWLGDQDAIHYMTEQAPAAVIELEKYLKFGKGGQAHRCCCVADRTGHSLLHT
LYGRSLRYDTSYFVEYFALDLLMENGACHGVVALCIEDGTIHRLRAKNTVLATGGYGRTY
FSCTSAHTTTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSEG
ERFMERYAPVAKDLASRDVVSRSMTIEIREGRGCGPEKDHVYLQLHHLPPQQLAMRLPGI
SETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYKGQVITHVNGQDQVVPGLYACGEAAS
ASVHGANRLGANSLLDLVVFGRACALSIAESCKPGEPVPSVKPNAGEESVANLDKLRFAN
GNLRTSELRLNMQKTMQTHAAVFRTGSVLQEGCEKLSSIYKDLDNLKTFDRGVVWNTDLV
ETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDEYDYSKPTEGQQKKPFDQHWR
KHTLSYVDVGTGKVTLEYRPVIDNTLNEEDCAMVPPAIRSY
NT seq 1926 nt NT seq  +upstreamnt  +downstreamnt
atggcggcggcggccgtgaggggatggcggcgacctttgcgggcgttccgctggccgggg
ccagcggcctgccaggccttctctcgtcagttccacttcacagtttacggaaagaaaagt
gcatctgctaaagtatcggattcaatttcaactcagtatcccgtcgtggaccacgaattt
gatgccgtggtggtgggcgcaggaggtgccgggctgcgagctgcatttggcttgtctgag
gctggctttaacacagcatgtgttaccaagctcttccctaccaggtcccatactgtcgct
gcacagggaggaatcaatgctgctctggggaacatggaagaagataactggcggtggcat
ttctacgacacggtgaaaggctcggactggctgggggaccaggatgccattcattacatg
acggagcaggccccggctgccgttattgagctggagaaatacctgaagtttgggaaaggg
gggcaggcccatcgctgctgctgcgtggctgaccggactggccactccctgctgcacacg
ctctacggccggtctcttagatatgatactagctactttgtggaatattttgccttggac
ctccttatggaaaacggagcatgtcacggcgttgtggccctttgcatagaagatggcacc
atccatcgtttgagagcaaagaatacggtccttgccactggaggatacgggcgcacctac
ttcagctgcacatctgctcacaccaccactggagacggcaccgcaatggtcacacgggcc
ggccttccctgccaggacctggagtttgtgcagttccatcctacaggaatctatggggct
ggctgccttattacggaaggctgtcgtggtgaaggaggcattctcattaacagtgaaggc
gaaaggttcatggagagatatgcgccagtcgccaaggacctagcttcaagggatgttgta
tctcgttctatgaccatcgagatccgtgaaggaagaggatgtgggcccgagaaggaccac
gtgtacctgcagctgcatcacctgcctccgcagcagctagcgatgcgtctcccggggatc
tcggagacggccatgatatttgctggggtggatgtgacgagggagcccattcctgtcctg
cccacggtgcattacaatatgggggggatcccgactaactacaaaggacaggtgatcact
catgtcaatggccaggatcaggtcgtgccaggcttgtatgcttgtggcgaagcggcatct
gcgtccgtccacggggccaaccgcctgggggcaaactctctcttggacttggtggtcttt
ggccgcgcctgtgctcttagtattgcggaatcctgcaagcccggagaaccagttccgtca
gttaaaccaaatgcaggggaagaatctgtcgcaaacctggacaaattgcgctttgccaat
ggaaacctaaggacatcagaactgaggcttaatatgcagaagaccatgcaaacacatgcc
gctgtgttccgtacgggctctgtcctccaggagggttgtgagaaactgagcagcatctac
aaggatctggacaatctgaagacatttgacagaggggtggtctggaatactgacttggtg
gagactttggaacttcaaaacctgatgctttgtgcgttgcaaactatttatggtgccgaa
gctcggaaagagtcgcgtggtgctcacgcaagggaggactacaaggttaggatagatgaa
tatgactattccaaaccaactgaaggacaacagaagaaaccatttgatcagcactggaga
aagcacaccctctcgtatgtcgatgtcgggactgggaaggttactttggagtacagacct
gtcatcgacaacactctaaatgaagaagactgtgccatggtcccacctgctattcgttcc
tattag

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