KEGG   Gekko japonicus: 107112897Help
Entry
107112897         CDS       T04299                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
gja  Gekko japonicus
Pathway
gja03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:gja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    107112897 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gja03400]
    107112897 (LIG4)
Enzymes [BR:gja01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     107112897 (LIG4)
DNA repair and recombination proteins [BR:gja03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     107112897 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT DNA_ligase_A_C BRCT_2 DNA_ligase_IV RNA_ligase mRNA_cap_enzyme LIG3_BRCT
Motif
Other DBs
NCBI-GeneID: 107112897
NCBI-ProteinID: XP_015269591
LinkDB All DBs
Position
Un
AA seq 912 aa AA seqDB search
MSSIPASRAPSQVTVASQVPFADLCSTLEQIQKCKSRPEKTKYFKDFLDSWRKFHDALHK
GEKNVMDSFYPAMRLTLPQLERERMAYGIKETMLAKLYIELLNLPKGGKDALKLLNYRTP
AGSRGDAGDFATIAYFVLKPRCIKQGQLTIQEVNVLLDSVSTNNASKRKDLVKKSLLQLI
TQSSALEQKWLIRMIIKDLKLGISQQTLFSIFHPDATELFGVTTDLEKVCRQLHDPSVSL
SDVSISLFSAFKPMLAAIADIQQIEKQMNHQSFYIETKLDGERIQMHKDGDVYKYFSRNG
YDYTLQFGASPLEGSLTPFVHNVFREDVQNCILDGEMMAYNPMTQTFTQKGSKFDIKRMV
EDSELQTCFCVFDVLMANGQKLGHEMLSKRYEILNKLFTPITGRIQVVLKHQASTRKEVI
DALNDAIDNREEGIVVKDPASVYKPDKRGEGWLKIKPEYVDGLMDELDLLIVGGYWGKGL
RGGMMSHFLCAVAEIPLPGEKPSVFHSICRVGSGYTMKELYDLGLKLAKHWKPYRKKDPP
CNILCGTEKPEVYIEPCNSVIVQVKAAEIVSSDMYKTDCTLRFPRIEKIREDKEWYECMT
LDLLEQLRGKASGKLATKHLDVGHDEPQGKKRKAVPKVKKIIGVMDHFKAPDLSNVSRLS
SIFEDVEFCVMTGTESCSKNELESKIAEFGGSVVQNPGPDTYCVVVGTENIRVRNIVSSN
KYDVVRAEWLLQCFERQAFVPWQPTFMIHMSSETKEHFACKYDRYGDSYTADTDMAQLKG
LFSRMSNLREEISWDAIADLEERYSWGSSQLSMFRQRTVYLDLSDKVGDSRDKVNRTRVV
TGALMLRFHGARVSLRLEEGVSHVIIGEDRGRVKEIKAVRRTFTRKFKILSEQWVKDSIK
AGKLQNEDAYLI
NT seq 2739 nt NT seq  +upstreamnt  +downstreamnt
atgtcttctatccctgcttcccgtgctccttcacaggtgactgtggcatcacaagtccct
tttgcagacctctgctcgactctagaacaaatacagaaatgtaaatcccggccagagaag
acaaagtatttcaaagattttttagattcctggaggaaatttcacgatgcccttcacaaa
ggtgaaaagaacgtgatggattctttttatcctgctatgagacttacccttccccagctg
gaaagggagaggatggcttacggaattaaagaaacgatgctggctaagctctacatcgaa
ctgctaaacttacccaagggggggaaagacgctttaaaacttttaaattatcgaacccct
gctggctcgcggggagatgctggggattttgcgacaatagcctattttgtgctgaagcca
aggtgcatcaagcaaggtcagttgaccatacaggaggtgaacgttcttctagattctgtt
tctaccaataatgcttctaaaaggaaagatttggtcaagaagtctcttctgcagttgata
actcagagctcggcactcgaacagaagtggctgattagaatgattataaaggatttgaaa
ctgggcatcagccaacagaccttattttccatcttccatcccgacgccacagagctgttc
ggcgtcacaaccgatctggagaaggtttgcaggcagctgcacgatccttccgtgtctctc
agcgatgtttccatttctctcttttccgccttcaagccgatgcttgctgcaatcgccgac
atacaacaaattgaaaagcagatgaaccatcagagtttctacatagaaaccaagttggac
ggcgagcggatacagatgcacaaagatggggacgtgtacaagtatttctcgcggaatggc
tatgattatactctgcagtttggggcatcccccctcgaaggttcgttgacgccgttcgtt
cataacgtttttcgggaggatgttcagaactgcattctggatggcgaaatgatggcctac
aaccccatgacacaaaccttcacgcagaagggaagtaagtttgacatcaagaggatggtg
gaggattctgaactgcagacgtgcttctgcgtgtttgatgtcctaatggcgaatggccag
aagttgggtcacgagatgttgagcaaaaggtacgagatactcaataagctctttacccca
ataacaggtcgaatacaggttgttcttaaacatcaagccagcacacggaaagaagttatc
gatgctctaaatgatgctatagataacagggaagaaggaattgtggtgaaagaccccgca
tccgtttacaagccagataaacgtggagaaggatggctgaagataaaaccagagtacgtc
gatgggctgatggatgagctagaccttctgattgtggggggctactggggaaaaggcctt
cgtggtggcatgatgtcccacttcctgtgcgcagttgctgagatacctctacctggtgaa
aaaccatctgtgttccattctatttgtcgtgtcggttctggctacactatgaaagagctg
tatgatcttggcctgaaattagccaaacactggaaaccgtatcgtaaaaaagatcctcct
tgcaacatcttgtgtgggacagagaagcccgaggtctatattgagccttgcaattcagtc
attgttcaggtcaaagcagctgagattgtcagtagcgatatgtacaaaactgattgtacc
ttgcgtttccctcgtattgagaagatcagagaggataaagagtggtacgaatgtatgact
cttgaccttttagaacagctcagaggcaaagcttcagggaagctggcgacgaagcacctc
gacgttggtcacgatgagccgcaagggaaaaagcgtaaagctgtgcccaaggtcaaaaaa
ataattggagtaatggatcattttaaagcccccgatctttctaacgttagcagactttcc
agcatatttgaagatgttgagttttgcgtcatgactgggacagaaagctgttcaaaaaac
gagctggaaagcaaaatagcagagtttggcggtagcgtagtacaaaacccgggtccggac
acgtattgcgtcgtcgtagggactgagaacatccgagtgagaaatattgtttcttccaac
aagtatgatgttgtgagagcagagtggcttttacagtgctttgaaaggcaggcgtttgtg
ccgtggcaacctactttcatgattcatatgtcctctgaaacgaaagaacactttgcctgc
aagtatgaccgctatggtgacagttacactgctgatactgacatggcccagttaaagggg
ttgttctcacggatgagtaatttgagggaggagatctcttgggacgcgattgctgaccta
gaagaacggtattcctggggcagctctcagctcagcatgttcaggcagcgcaccgtttac
ctggacctctctgacaaagtcggcgattcgagagacaaagttaatcggacgagagtggta
accggcgcgttgatgcttcgctttcacggagcgagggtcagcttgcggctggaggaaggg
gtgtcccacgtaattatcggggaagatcgtggtcgggtaaaggagataaaggcggtcaga
cgaacatttacaaggaagtttaaaattctgtctgaacagtgggtaaaggattccataaag
gctgggaaattacagaatgaggatgcttacttaatttaa

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