Gekko japonicus (Schlegel's Japanese gecko): 107112992
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Entry
107112992 CDS
T04299
Symbol
ERCC6
Name
(RefSeq) ERCC excision repair 6, chromatin remodeling factor
KO
K10841
DNA excision repair protein ERCC-6
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107112992 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gja03036
]
107112992 (ERCC6)
03400 DNA repair and recombination proteins [BR:
gja03400
]
107112992 (ERCC6)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107112992 (ERCC6)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
107112992 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
TFIIF_beta
Spt5-NGN
Motif
Other DBs
NCBI-GeneID:
107112992
NCBI-ProteinID:
XP_015269685
LinkDB
All DBs
Position
Un
AA seq
1477 aa
AA seq
DB search
MPSEKPLSEGSPQEQSSGAGRNDSCPEEATTSRQGSHSSPGDSHARDLWWEDCDPEDEPS
TSSAGVSSRVSRKAPALLHIDRQQIQPVGQCAQAEELRGLGVDVYDQEVLEQGVLKQVDD
AINEANKAVRIAEAEKDYQSVLDDLRSCTASLKQIGTIIEQLTPHAATSKDINRKLDSVK
RQKYNKEQQLKKIRAKQRHLEAVLGKKTPDGTNDAEWEEIEEAGPSSLGSMLTPVQETEW
EALIRTGQMTPFGTKIPQKEEKKPRRVMLNESSDFDKYLADQAKLSFERKRPSVRKGAKR
KASSENGPARTPGRGIKGKGDKGKRRSKTDGCLQKHMRKLQNHVLHIQSKGRLPRAQERQ
GAGPPEESEESECAREEELSGPEDELLHVRDDADDYQVNPPLRRRTNPSLTEFPEEPEED
DFSPSSDEEEEDSVRKRSIKRCKDDGDVEYYKQRLRRWRKQQLKDRHGRLMAGEDPDESD
AEFDESFRVPGFLYKKLFKYQQTGVRWLWELHGQQAGGILGDEMGLGKTIQIIAFLAGLS
YSKIRTRGSNYRFRGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYANKKVKL
IREIVACNGILITSYSFIRLLQDSIHGYDWHYVILDEGHKIRNPNAAVTVACKQFRTPHR
IILSGSPMQNNLKELWSLIDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTAYRC
ACVLRDTINPYLLRRMKSDVQMSLSLPDKNEQVLFCRLTDEQYQVYKNFIDSKEVYQMLN
GDMQIFSGLITLRKICNHPDLSSGGPKILKGVPDEELDEEDHFGYWKRSGKMIVIESLLK
IWRKQGHRVLLFTQSRQMLHILEAFLKQKSYSYLKMDGTTAVGSRQPLVARYNEDASIFV
FLLTTRVGGLGINLTGADRVIIYDPDWNPSTDTQARERAWRIGQTKEVTVYRLLTAGTIE
EKIYHRQIFKQFLTNRVLKDPKQRRFFKPNDLYELFTLTSPDGTQGTETSAIFAGTGSDI
PTPKRAPKRKSVALTGASKTHSPPSEHMSTKLSKLSDSFSARQCARSPTTTVDSVQNTEE
TAEAFLRTSNFPKEDAHITTGNMDDSLPREEEKGLKTPENRESEDAGHLNSFSVGESSAG
GARQQNSAHGNTSQCKEQDGGFGSERSDNSPNKCTSKSKHGRREHEGGRGPLKRARSSRD
ARFEGERIPHLVKKRKYQREDKKEERDSKKSDDYVLEKLFKKSGIHSVMKHDAIVEASSP
DYVLVEAEANRVAQDALRALKLSRQRSRGAASGVPTWTGPSGPSGSPGRVNRFGQKKNPA
LAVPLSSSPSPGAGCKDTERARKESKSSAPFDGRGGEGEASAAPLDSSSLLAKMRARNHL
VGPWRRDGVREESPLPASGAAPPTETEHDELLVDIRNFIAFQAQVDGQATTRELLQEFES
KLTVEQSCIFRELLRNLCTFHRSPSGEGLWKLKPEFS
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgaaaagcccctgtcagaaggcagtcctcaggagcaaagttctggagcaggt
agaaatgactcctgtccagaggaagcaacaacgtccagacaaggaagccactcatctcct
ggtgacagtcatgccagggacctttggtgggaggactgtgatcctgaggatgagccatct
acatcgtctgcgggagtttcttccagagtgtcgaggaaagcaccggctctgctgcatatt
gaccggcagcagatccagcctgtggggcagtgcgctcaggcagaggagctcagaggcctt
ggcgttgatgtgtacgaccaggaagtgctggagcaaggcgtcctcaagcaggtggacgat
gcaataaacgaagcgaacaaggcggttcgtattgctgaagcggaaaaggattaccagtca
gtcctggatgacctcaggtcatgtacggcgtccctgaaacaaatcggtacaattattgaa
cagctcactcctcacgctgcaaccagcaaagatattaacagaaaactagattctgtgaag
cggcagaaatacaacaaggagcagcagttgaaaaagatcagagcaaagcaaaggcacctt
gaagctgtccttgggaaaaagactcccgatggaacaaacgatgctgaatgggaggaaatt
gaagaagctggcccctcgtcccttggcagtatgcttacaccagtgcaggaaacggagtgg
gaggcacttattcgtactggtcagatgactccttttggaacaaaaataccccagaaggaa
gagaagaagccccgccgggtcatgctcaatgaatcgtctgactttgacaagtatttggcg
gatcaagccaagctctcctttgaaaggaagaggccgtccgttcgtaagggagccaagcgg
aaagcgagttcagagaacggtccagccagaactccagggcgtggcatcaaaggcaaaggg
gacaaggggaagcgccggtccaaaacagacggttgtctgcagaagcacatgaggaagctg
cagaaccacgtcctccacattcagtccaagggcagacttccgagggcccaggagagacag
ggagcgggtccgcccgaggagagtgaagagtctgaatgtgcccgtgaggaagagctttcc
ggccccgaggatgaactgcttcatgtccgtgatgacgccgatgactaccaagtgaaccct
ccgctgcggagaaggacaaatccgtcactgacagagtttccggaagaacccgaggaggat
gacttttccccaagctccgacgaagaggaagaagattctgtcagaaagcgcagcataaag
cgatgcaaagacgatggcgacgtagagtactacaaacagaggctgaggaggtggcgaaaa
cagcagctgaaagaccgccacgggcgactgatggcaggggaagatccggacgaaagcgat
gccgaatttgacgagagtttccgtgtgccaggttttctctataagaagcttttcaagtac
cagcagacaggtgttaggtggctctgggaattgcacggccagcaggcgggaggaattctg
ggagacgagatgggattgggcaaaaccatccagataattgccttcttggcaggtctcagc
tacagcaagatcaggactcgcggttcaaattacaggttcagaggcctgggcccaacagtg
attgtatgtccggccactgtgatgcatcagtgggtgaaagagttccatacttggtggcct
ccgttccgagtggcaattcttcacgagacgggctcttatgccaacaaaaaggtgaagctg
attcgagagattgtagcctgtaatggtattttgatcacctcctattcgtttattcgcttg
ctgcaagacagcatccacggttatgactggcactacgtgattctagatgaggggcataaa
atccggaacccaaatgctgcggttacagttgcttgcaaacagttccgcactccgcatcga
atcatcttgtctggctcaccgatgcaaaacaacctaaaggagctctggtctctcattgac
ttcgtatttcctgggaaacttggaacactgcctgtcttcatggagcaattttccgttccg
ataaccatggggggttatgccaatgcctctccagtccaggtgaaaactgcctacagatgt
gcttgtgttttgcgggataccattaatccttacctgctgcgaaggatgaagtcagatgtc
caaatgagcctctcgctaccagataagaatgaacaggttctgttttgccgcttgacagat
gagcaataccaagtttacaagaactttatcgattccaaagaagtttatcagatgctcaat
ggagacatgcagattttctccggactgatcaccttgagaaagatctgcaaccacccagac
ctctcctccggggggccgaagattttgaagggtgttcccgatgaagagttggacgaagag
gaccattttggttactggaagcgttccgggaaaatgatagtcattgagtctctgctgaaa
atctggcgcaagcagggccacagagtgctgctcttcacgcagtcgcggcagatgctgcac
atcttggaagcgtttctgaagcagaagagctattcctacttgaaaatggacggcaccaca
gcagtcgggtcgaggcagccgcttgtggcaaggtacaacgaggatgcttccatatttgta
ttcctccttacgacccgggtcggcgggcttggcataaacctgacaggggcagacagagtg
atcatctatgacccagactggaatcccagcacagatacccaggctcgagagcgtgcgtgg
cgaattgggcagacgaaagaggtgacggtttacaggcttcttactgcagggaccattgaa
gaaaagatttaccacaggcaaatcttcaagcagttcctcacaaacagagtgttgaaagac
ccaaagcaaaggcgctttttcaaacccaatgatctctatgaactcttcaccttgaccagc
ccagatgggactcaggggacagaaaccagtgctatttttgcaggcactggttctgacatc
cccacacccaagagagcaccgaagcgcaaatctgtggccctcaccggggcttctaaaaca
cactctcctccttccgagcacatgtcaaccaaactcagcaaactgtccgattccttctca
gcaaggcagtgtgccaggtcccctaccactacagtggattccgttcagaataccgaggaa
actgcagaagcattcctgcggacttctaacttcccaaaggaggatgcccacatcacgact
ggtaatatggatgattcactccccagagaggaagagaagggtctgaaaacccctgagaac
agggaatctgaggatgcgggacatttgaactccttttctgttggagaatcaagtgccggt
ggagcgaggcagcagaattctgcacatggaaataccagccagtgtaaggagcaagatgga
ggctttgggagtgagcgatcagacaacagtcccaacaagtgcacttcgaaatccaaacac
ggccgtcgagagcatgaaggcggcaggggcccgttgaagagggccaggagctctcgcgac
gccaggttcgagggcgagcggattcctcatctcgtgaagaaaaggaagtaccagagggaa
gacaagaaggaagagagagattccaagaaaagcgatgattacgttctggagaagctgttc
aaaaaatcaggcatccatagtgtcatgaagcacgatgccatcgtggaggcctccagtcca
gactacgtgctggtggaagcggaagccaatcgcgttgcccaggatgctcttcgagctttg
aaactctcccggcagcggtcccgaggagccgcgtctggcgtgcccacttggactggcccc
agtggcccatcaggctcaccaggaagagtcaacaggtttgggcagaagaagaacccagcc
ttggcagtgccgctgtcatcttctccatccccgggagcgggttgcaaggacactgaaaga
gcgaggaaggagagcaagagcagcgctccctttgacggccggggcggggaaggagaggcc
tctgcagctcccctggactcctcctctctgctggccaaaatgagggcaagaaaccacctg
gtcggaccctggagaagggacggtgtgagagaggagagccccctgccggcatcaggggct
gcgccccctacagagacggaacacgatgagttgcttgtagatattcgaaacttcatcgcc
ttccaagcccaggtggatggtcaggccaccactcgggagctcctgcaggagtttgagtcc
aagctgactgtggagcagtcttgcatctttcgagaactcttgaggaatctctgcactttt
catagaagccccagcggggagggactctggaaactcaagccagaattttcctga
DBGET
integrated database retrieval system
