Gekko japonicus (Schlegel's Japanese gecko): 107119402
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Entry
107119402 CDS
T04299
Symbol
RPA1
Name
(RefSeq) replication protein A1
KO
K07466
replication factor A1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03030
DNA replication
gja03420
Nucleotide excision repair
gja03430
Mismatch repair
gja03440
Homologous recombination
gja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107119402 (RPA1)
03420 Nucleotide excision repair
107119402 (RPA1)
03430 Mismatch repair
107119402 (RPA1)
03440 Homologous recombination
107119402 (RPA1)
03460 Fanconi anemia pathway
107119402 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gja03000
]
107119402 (RPA1)
03032 DNA replication proteins [BR:
gja03032
]
107119402 (RPA1)
03400 DNA repair and recombination proteins [BR:
gja03400
]
107119402 (RPA1)
Transcription factors [BR:
gja03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107119402 (RPA1)
DNA replication proteins [BR:
gja03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107119402 (RPA1)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107119402 (RPA1)
MMR (mismatch excision repair)
107119402 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
107119402 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
107119402
NCBI-ProteinID:
XP_015277352
LinkDB
All DBs
Position
Un
AA seq
614 aa
AA seq
DB search
MAVRLSEGAIASIMQGEEVETPILQLITIRAIATGNGLPRYRMLMSDGVNILSSFMLATQ
LNSLVDQGHLVAHAICKINRFIVNILKDGRRVIVLMDLDVVKTADAVGGKIGNPVLYAEG
SGQGGQQQQTSAFAAVEAPSKPLQQKWNPAAGPPAKHTSPPQMLGKAGGSSFLSTPGGSQ
VKVVPIASLNPYQSKWTICARVTQKSQIRTWSNSRGEGKLFSIELIDESGEIRATAFTDQ
VDRFFPIIELNKVYYFSKGNLKTANKQYTTVKNDYEITFTNETSVIPCEDAQHLPSVKFG
FVSIGNLENENKDSIVDVIGICKSFEDDRKIVMKASNREVSKRDIHLVDMSGKMVTVTLW
GTEAEKFDGSRQPVVAIKGARVSEFGGRSLSVLSSSTVVMNPDIPEAFKLRGWFDSEGQL
QECASISNTQGGPAAGGNTNWKTLYEAKSENLGQGDKADYFSCVATVVYLRKENCMYQAC
PSQDCNKKVIDEQNGLYRCEKCDREFPNFKYRMILSINVADFQDNQWVTCFQESAEAILG
QNAAYLGELKEKNEHAFDEIIQKANFTTYEFRIRVKLETFNDESRLKATAMDVKPVNHKE
YSKRLIMNIRKNNV
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcgcctgagcgagggggcgattgcgtccattatgcaaggagaggaggttgag
acacctatcttgcaacttattaccatccgagctattgcgactggaaatggcttgccacgt
tatcgaatgctcatgagtgatggagtgaacatactttcttctttcatgctggcgacgcag
ctgaactctctggttgaccagggacacttggtcgcacatgccatctgcaagattaaccgg
tttattgttaacatcttgaaggatggaaggagagtgattgtcttgatggatttagatgtt
gtgaaaactgctgatgcggtaggcggtaaaatcggcaatccagtgctatatgctgaagga
tctgggcaaggagggcagcagcagcagacctctgcttttgcagccgtcgaagcaccaagc
aagccactgcagcagaaatggaaccctgcagcaggtcctccggcgaaacacaccagccct
ccacagatgcttgggaaagcaggcggctccagcttcctgagcactcctggtggctctcag
gtgaaagtggtgcccattgccagtttgaatccatatcagtccaagtggactatttgtgca
cgggtgactcagaaaagtcagatccgaacgtggagtaactcacgtggggaagggaagctg
ttctccatagagctgattgacgaaagcggcgagatcagagcaactgccttcacggaccaa
gtggacaggtttttccccattattgagttgaacaaggtctattacttctccaaaggcaac
ttgaagactgctaacaaacagtacacaactgtgaagaatgattacgagatcacattcaca
aacgagacttctgtcataccatgcgaggatgcacagcacctcccctcagtcaagtttggt
tttgtttccattggtaatctggagaacgaaaacaaagattcaatagtggatgtaattgga
atttgcaagagctttgaggacgacagaaaaattgtaatgaaggcttccaatcgagaggtg
tccaagagggatatacacttagtggacatgtctggaaaaatggtgacagtcacgctatgg
ggaactgaagctgaaaaatttgatggctcccggcaacctgtggtggccatcaaaggagcc
agagtctcagagtttggtggccgaagtctttctgtcctttcatcaagcactgtcgtcatg
aaccctgatattccagaagccttcaagctgcgtggatggtttgactctgagggccagctt
caagaatgcgcctccatctctaacacacagggtgggcctgctgcaggcggaaacaccaac
tggaaaactctgtatgaggctaaatcagagaacctcgggcaaggagataaggcggactac
tttagttgtgtggccacagtggtatatttgcgcaaggagaactgcatgtaccaggcttgc
ccatcgcaagactgtaataagaaagtgattgatgaacagaacggactgtatcgctgtgaa
aaatgtgatcgggaattccccaacttcaaatatcgtatgatcctttcaataaacgtggca
gattttcaagacaatcagtgggtaacttgtttccaggagtcagcagaggccattcttggg
cagaatgccgcttaccttggagagctgaaggaaaagaatgagcatgcttttgatgagata
attcagaaagccaacttcactacctatgaattccggatccgagttaagctggagactttt
aatgacgaatcgcgcctgaaggctacggcaatggacgtgaagcctgtcaaccacaaggag
tacagcaagaggctgatcatgaacatccggaagaacaatgtataa
DBGET
integrated database retrieval system
