KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107125737
Entry
107125737         CDS       T04299                                 
Symbol
AFF4
Name
(RefSeq) AF4/FMR2 family member 4
  KO
K15185  AF4/FMR2 family member 4
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:gja00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107125737 (AFF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gja03021]
    107125737 (AFF4)
Transcription machinery [BR:gja03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     107125737 (AFF4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 107125737
NCBI-ProteinID: XP_015284679
LinkDB
Position
Un
AA seq 1182 aa
MRCILRSGLWLACNMNREDRNALRIKERERRNQEIQQGEEAFPPNSPLFAEPYKVTSKED
KLSSRIQSMLGNYDEMDDLIGDRSLQKLVGFPKPTVPSTTDEKSTQNFFGEQRHSTGSHQ
SSKWTPVGPAPSTSSQSQKRSSGLQSGHGSQRNSGSSTSSSGQRHDRDSYSGSGSTSSRK
KTQHGSEHSKSRSSSPGKPSTVSSVNPSHSRSHGNDHHSKEHQRSKSPRDPDANWDSPSR
VPSFSSGQHSSQSFPPSLMSKSNTMLQKPTAYVRPMDGQESMEPKLSSEHYSSQTHSNNM
NELKPSSKAHLTKLKIPSQPLDASASGDMSSVDEILKEMTHIWPPPLTAIHTPCKTEPSK
FPFPTKETQQSNFGTGEQKRYNPSSKASNSHQSKSCESNQTDVLINDLTVTSSEDSDGEQ
DSDKTVPRGTPGSNSEPSQHTSEGADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEP
SQNATPEPEPPPANRWQLDNWLNKVNPHKVSPASSVDSNIPSTQSYKKEGRDQSSGSGYA
DQSGSKDSVSSTPGRDSKATQKGSESSRGRQKSPAQSESIQRRTVGKKQPKKADKPSVEE
PPRGGLKIESETPLDMATNIPSNRHKAATKGSRKPNIKKEPKSSPRPTTEKKKCKVAGKS
SQKSKEFIETSTSSSDSDENESLPPSSQTPKYSESNRTPVKPSIEEDDNFLRQRMFSPME
EKELLSPLSDPDERYPLIVKIDLSLLTRIPGKPYKDTDPSKAERKNVSEKHPREPQKTSS
EKTSTKGKRKHKNAEENRAIESKKTKLDEKPSSVHKTSSNRESSKQSAVKEKDLLPSPCT
TPAIQKDSKQEHVSRKRTISQSSSLKSSSNNNKEGSSSKSSSSKQKKTEGKSSSNSKETK
EKVLNNSSNCSSASATTADSSKSRRPKLLFDDRTYSADHYLQEAKKLKHNADALSDRFEK
AVYYLDAVVSFIECGNALEKNAQESKSPFPMYSETVELIKYTMKLKNYSAPDATAADKRL
AVLCLRCQSLLYLRLFKLKKESALKYSKTLTEHLKNSYNNSQAPSPGMGSKPGSMPSPVS
PKLSPGNSGSYSSGSTNPSGSTSSVTIPQRIHQMAASYVQVTSNFLYATEIWDQADQLAR
EQKEFFAELDKVMGPLIFNASLMTELVRYTRQGLHWLRSDAK
NT seq 3549 nt   +upstreamnt  +downstreamnt
atgagatgtatcttaagaagtggtttgtggctggcatgcaacatgaaccgtgaagaccgg
aatgcgctgcgtattaaagagagagagagacgtaatcaagaaattcaacagggtgaagaa
gcctttccacctaactctcctctctttgctgaaccatacaaagttaccagcaaagaagat
aaattgtctagccgtatccaaagcatgcttggaaactatgatgaaatggatgatcttata
ggtgaccggtctctccaaaagcttgttgggtttcccaaaccaacagtaccatcaacaaca
gatgaaaaatcaacccaaaatttttttggtgaacagagacatagtactggctctcatcag
agcagcaaatggacgcctgtaggtccagcgcctagcacttcttcccagtcacagaagcgt
tcttcaggtttacagagtggacatggcagccagcgcaacagtggcagtagcactagcagt
agtgggcagagacatgaccgtgattcatatagtggtagtgggagcaccagtagccgaaaa
aaaacccagcatggatcagaacactcaaagtctcgttcttccagccctggcaaaccatct
actgtttcttctgtgaaccccagccattccagatctcatggaaatgatcaccacagcaag
gagcatcaacgttctaaatctccacgagacccagacgccaactgggactcgccatcccgt
gtaccttcattttctagtggccagcattctagccagtctttccctccttcacttatgtct
aagtctaacacaatgttgcagaagcccactgcctatgtaaggcccatggatggtcaggag
tccatggaaccaaagctttcttctgaacactacagtagccagactcacagcaacaatatg
aatgaactgaaacctagtagcaaagcacatttaacaaagctgaaaattccctctcagcct
cttgatgcatcagcatctggtgacatgagcagtgtggatgaaattctgaaagagatgacc
catatttggccacctccattgacagctattcacacgccttgcaaaactgaaccttcaaaa
tttccattcccaaccaaggaaactcagcagtctaattttggcactggagaacaaaaaaga
tacaatccttcttcaaaagcatctaatagccatcagtctaaatcatgtgaatcaaaccag
acagatgtgctgataaatgatctaacagttaccagtagtgaagacagtgatggtgagcag
gattcagataagacggtcccaagaggtacacctgggagtaattctgagccatctcagcat
acaagcgaaggggcagataattccagggatgattcaagcagtcacagtggatctgagagc
agttctggttcagactctgaaagtgaaagtagttctagtgacagtgaggccaatgagcca
tcacagaatgcaactccagagcctgagccacctccagcaaataggtggcagcttgacaac
tggctgaacaaagtgaatccacataaagtatcaccagcttcttctgtggacagtaatatc
ccttcaacacaaagctacaaaaaagagggcagagatcagagttcagggagtggatatgca
gatcaaagtggatctaaagattcagtttcttctactcctggaagagattctaaagctacc
cagaaagggtcagagagcagtcgtggtagacagaaatcacctgctcagagtgaaagcatc
caaaggaggactgtaggtaaaaaacagcccaaaaaggcagacaaaccatctgtggaagaa
cctcctagaggggggctgaaaatagaaagtgaaacccctttggacatggcaacaaatata
ccttctaacagacataaggcagccactaaaggctccagaaagcccaatataaagaaggaa
cccaaatcctcccctcggcctacaacagagaaaaagaaatgcaaggttgcaggcaaatcc
tcccagaaatccaaggaattcatagaaactagtacctcatcttctgattctgatgagaat
gagagcctgcctccttcttcacaaacccccaaatactctgagagcaataggactcctgtt
aagccctccatagaggaggatgacaactttttacggcaaagaatgttctctcctatggaa
gagaaggaactcctttccccactcagtgatcctgatgaaaggtatccccttattgtgaag
attgacttgagcctcttaaccagaataccagggaagccttacaaagatacagacccatca
aaagctgaaaggaaaaatgtgtctgagaagcatccaagggagcctcagaaaacatcctct
gagaaaacttccaccaagggcaagaggaagcataagaatgcagaagaaaatcgagccatt
gaaagcaagaaaacaaagctggatgaaaaaccctcatccgtacacaagacttctagtaac
agagagtcatcaaagcaaagtgctgttaaagagaaagatcttctcccttctccttgcacc
accccagccatccaaaaagattccaagcaagagcatgtctcaaggaagagaaccatcagt
cagtcttcttccttgaaatcaagcagtaacaacaacaaggaaggcagtagcagtaaaagt
agctcatcaaaacaaaagaagactgaagggaaatcttctagtaattctaaggaaacaaaa
gaaaaggttttaaataattcttcaaactgctcttctgcctccgctacgactgcagatagc
tcaaaatcccggaggccaaaactactatttgatgacaggacttactctgcagatcattac
ttacaagaagcaaagaagttaaagcacaatgctgatgcattgtctgacaggtttgagaaa
gctgtgtactaccttgatgctgtagtgtcattcattgaatgtgggaatgcattggagaag
aatgctcaggagtcaaagtccccattccctatgtattctgaaacagtggagttgatcaag
tacactatgaaattgaagaattactcggcaccagatgctactgctgctgacaaaagacta
gcagtactgtgtcttagatgtcagtccttgttatatttaagacttttcaagctgaagaag
gaaagtgcattgaagtattccaagacactaactgaacatctaaagaattcttataataat
tctcaagctccatcacctggtatgggaagcaaaccagggagcatgccgtctccagtctct
ccgaaattgtctccggggaattctggaagctactcttcagggtcaacgaacccttcaggg
agcacttcttcagtgactattccacagagaatccaccagatggcagccagctatgtccag
gttacttctaattttctgtatgccactgaaatttgggaccaagcagatcagcttgccaga
gagcaaaaggaattcttcgcagagctggataaagttatgggccctttgatctttaatgca
agtctcatgacagagctagtacgttacaccagacagggactacattggttgcgttcagat
gccaagtga

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