Geobacillus kaustophilus: GK3421
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Entry
GK3421 CDS
T00217
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gka
Geobacillus kaustophilus
Pathway
gka03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GK3421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gka03400
]
GK3421
Enzymes [BR:
gka01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GK3421
DNA repair and recombination proteins [BR:
gka03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GK3421
Prokaryotic type
GK3421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAD77706
UniProt:
Q5KUD0
LinkDB
All DBs
Position
complement(3461092..3461781)
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AA seq
229 aa
AA seq
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MPILKNDWAPLLEEEFQKPYYLKLREFLKEEYRTRTIYPDMHDIFNALHYTPYANVKVVL
LGQDPYHGPGQAHGLSFSVKPGVPVPPSLANIFKELHDDLGCYIPDNGYLVKWAEQGVLL
LNTVLTVRRGQANSHRGKGWEYFTDRVIELVNEKDDPVVFLLWGRNAQEKKERITNPRHL
IIEAPHPSPFSAARGFFGHRPFSRTNAFLTKHGREPIDWQIENIGARAE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgccgattctcaaaaacgactgggctccgctgcttgaagaggagtttcaaaagccgtac
tacttaaagctgcgcgagtttttaaaagaggagtaccggacgcggacgatctatcccgat
atgcacgatattttcaacgcccttcattatacaccgtatgcaaacgtcaaagtcgtgctg
ctcgggcaagatccgtaccacggcccgggacaggcgcacgggcttagtttttccgtcaag
ccgggcgtgccggtgccgccgtccttagcgaacatttttaaagagctgcatgacgacctt
ggctgctatataccagataacggctatctcgtcaaatgggccgagcaaggggtgctgttg
ttaaacacggtgttgacggtccgccgcggccaggcgaactcccatcgcggcaaagggtgg
gaatatttcaccgaccgcgtcattgagctcgtcaacgaaaaagacgatccggtcgtcttt
ttgctttggggccggaacgcgcaagagaaaaaagaacggattacgaatccgcgccatctg
attattgaagcgccgcacccgagcccgttttccgccgcgcgcggctttttcggccatcgc
ccgttttcgcggacgaacgcgtttttaaccaagcacggacgcgaaccgatcgattggcaa
atcgagaacatcggcgcccgcgctgaatga
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