Glaciihabitans sp. INWT7: F1C58_14440
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Entry
F1C58_14440 CDS
T06751
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
gln
Glaciihabitans sp. INWT7
Pathway
gln03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F1C58_14440 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gln03021
]
F1C58_14440 (rpoB)
03400 DNA repair and recombination proteins [BR:
gln03400
]
F1C58_14440 (rpoB)
Enzymes [BR:
gln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F1C58_14440 (rpoB)
Transcription machinery [BR:
gln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F1C58_14440 (rpoB)
DNA repair and recombination proteins [BR:
gln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F1C58_14440 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QNE47977
UniProt:
A0A7G6ZB62
LinkDB
All DBs
Position
complement(2992393..2995902)
Genome browser
AA seq
1169 aa
AA seq
DB search
MAAARNASTTNSSKNGSPKNGRSAERLSFAKITDTLTVPDLLALQTESFDWLVGNDLWKE
RAAEAKASGRQDLPALTGLEEIFEEISPIEDLGETMQLSFTNPFLEEKKYSIDECKEKGK
TFSAPLYVEAEFMNHLTGEIKTQTVFMGDFPLMTPKGTFVINGTERVVVSQLVRSPGVYF
ERQQEKTSDKDIYSARIIPSRGAWLEFEIDKRDQVGVRIDRKRKQSVTVFLKALGLTSEE
ILEEFKGFASIELTLEKDNILTKDEALKDIYRKLRPGEQVAAEAARALLDNFYFNSKRYD
LAKVGRYKINRKLGIDAQLSNSVLSQQDILATIKYLVALHDEQKTLPGIRDGKPVELRLD
VDDIDHFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAA
IKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRERAGVEVRDVHPSHYGRMCPI
ETPEGPNIGLIGSLASFARINSFGFIETPYRRVINGVVSETIDYLTASEEDEYVVAQANA
PLTPDARFAEPRVLARKKGGEVDLFLIDEIGYMDVSPRQMVSVATSLIPFLEHDDANRAL
MGANMQRQAVPLLRSESPLVGTGMEGYAAIDAGDVITADAAGVVSEVSADVVTIQLDAGG
TQDYYLRKFNRSNQGTSYNNRVIVSAGDRIEVGQVLADGPATENGELALGKNLLVAFMPW
EGYNFEDAMILSQNLVKDDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPELLADLDE
RGIIRIGAEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEAGT
IIGVKVFDSQDGDDELGSGVNQRVVVFIAQKRKITEGDKLAGRHGNKGVISKILPVEDMP
FLADGTPVDIILNPLGIPGRMNFGQVLETHLGWVAKQGWDIKGNPKWAAKISEEAKSAAP
GTKVATPVFDGALEAEIEGLLDSTTPTRDGDRLIGSSGKAQLFDGRSGEPFPQPVSVGYM
YILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQEL
LTIKSDDILGRVKVYEAIVKGENIQEPGIPESFKVLIKEMQSLCLNVEVLSADGTAVSLR
DTDDEVFRAAEELGINISTRFENSSIDDI
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
ttggctgctgctcgcaacgcatccaccacgaactcgtcgaaaaacggatctcccaagaac
ggacgctcagctgagcgcctctcgttcgcgaagatcaccgacacgctgacggttcccgat
cttctcgcactccagacggagagcttcgactggctcgtcggcaacgacctctggaaggaa
cgcgctgccgaggcaaaagcctccggtcgccaggaccttccggcactcaccggcctcgag
gagatcttcgaagagatctccccgatcgaggacctcggcgagaccatgcagctctcgttc
acgaaccccttcctcgaagagaagaagtactcgatcgacgagtgcaaggagaagggcaag
accttctccgcaccgctgtacgtcgaggccgagttcatgaaccacctcacgggtgagatc
aagactcagaccgtcttcatgggcgacttcccgctcatgacccccaagggcaccttcgtc
atcaacggcaccgagcgtgtcgtcgtctcgcagctcgtgcgctcgcccggcgtgtacttc
gagcgccagcaggaaaagacctccgacaaggacatctactccgcccgcatcatcccgagc
cgtggtgcctggctcgagttcgagatcgacaagcgcgaccaggtcggcgtgcgcatcgac
cgcaagcgcaagcagtcggtcaccgtgttcctcaaggccctcggcctcaccagcgaagag
atcctcgaggagttcaagggcttcgcgtccatcgagctgacgctcgagaaggacaacatc
ctcacgaaggatgaggcgctcaaggacatctaccgcaagctccgtccgggagagcaggtc
gccgccgaggcagcgcgtgcgctcctcgataacttctacttcaactcgaagcgctacgac
ctggcgaaggtcggtcgttacaagatcaaccgcaagctcggtatcgacgcgcagctgtcg
aactccgtgctcagccagcaggacatcctcgcgacgatcaagtacctggtcgccctgcac
gacgagcagaagacgctcccgggcatccgcgatggcaagcctgtcgaactccgcctcgac
gttgacgacatcgaccacttcggcaaccgtcgcatccgcgcggtcggcgagctcatccag
aaccaggtgcgcaccggcctctcccgcatggagcgcgtcgttcgcgagcgcatgaccacg
caggacatcgaagcgatcaccccgcagaccctgatcaacgtgcgccccgtcgtcgccgcg
atcaaggagttcttcggtacctcgcagttgtctcagttcatggaccagaacaacccgctc
gcgggtctcactcacaagcgccgcctgtcggcgctcggcccgggtggtctgtcccgtgag
cgtgccggcgtcgaggtgcgagacgtgcacccctcgcactacggacgcatgtgcccgatc
gagaccccggaaggcccgaacatcggcctgatcggatcgctcgcgtcgttcgcccgcatc
aactccttcggtttcatcgagaccccttaccgtcgcgtcatcaacggtgtcgtctccgag
accatcgactacctcacggcgagcgaagaggacgagtacgtggtggcccaggccaacgca
ccgctcacccccgacgcccgcttcgccgagccccgcgtgcttgctcgtaagaagggtgga
gaggtcgacctcttcctcatcgacgagatcggctacatggatgtctcgccgcgccagatg
gtgtcggtcgcgacctcgctcatcccgttcctcgagcacgacgatgcgaaccgcgccctc
atgggtgcgaacatgcagcgccaggctgtgccgctgctccgcagcgagtcgccgctcgtc
ggtaccggcatggagggctacgcggccatcgacgccggagacgtgatcaccgcggatgcc
gcgggtgtcgtctccgaggtctcggccgacgtcgtcaccatccagctcgacgccggtgga
acgcaggactactacctgcgcaagttcaatcgctcgaaccagggaacctcgtacaacaat
cgcgtcatcgtcagtgcgggcgaccgcatcgaggtcggccaggttcttgccgatggcccc
gcgacggagaacggcgaactcgccctcggaaagaacctgctcgtggcattcatgccgtgg
gagggctacaacttcgaggacgcgatgatcctgagccagaacctggtgaaggacgacacc
ctctcctcgattcacatcgaggagtacgaggtcgacgcccgcgacactaagctcggcaag
gaagagatcacccgcgacctgccgaacgtgagcccggagctgcttgcagacctggacgag
cgcggcatcatccgcatcggagccgaggttcgccccggcgacatcctggtcggaaaggtc
acgccgaagggcgagaccgagctctcggccgaggagcgcctgcttcgcgccatcttcaac
gagaagagccgcgaggtgcgcgacacctcgctcaaggttcctcacggtgaggccggaacg
atcatcggcgtcaaggtgttcgactcgcaggacggtgacgacgagctcggctctggcgtc
aaccagcgcgtcgtcgtgttcatcgcccagaagcgcaagatcaccgagggcgacaagctc
gccggccgtcacggcaacaagggcgtcatctccaagatcctcccggtcgaagacatgccg
ttcctcgccgatggaaccccggtcgacatcatcctgaacccgctcggtatccccggtcga
atgaacttcggccaggtactcgagactcatctcggatgggtcgccaagcagggctgggac
atcaagggcaacccgaagtgggcagccaagatctccgaggaggccaagtcggccgctccg
ggcaccaaggtcgcgaccccggtgttcgacggtgcgctcgaggccgagatcgagggtctt
ctcgactccacgaccccgacccgcgacggcgaccgcctcatcggttcctccggtaaggct
cagctgttcgacggccgctccggtgagccgttcccgcagccggtgtcggtcggttacatg
tacatcctcaagctccaccacctcgtcgacgacaagatccacgctcgctcgacgggaccg
tactcgatgatcacgcagcagccgctgggtggtaaggcgcagttcggtggacagcgattc
ggtgagatggaggtctgggccctcgaggcctatggcgccgcttacgcactgcaggagctt
ctgacgatcaagtcggatgacatcctcggtcgagtcaaggtgtacgaggccatcgtcaag
ggcgagaacatccaggagcccggtatccccgagagcttcaaggtgctcatcaaggagatg
cagtcactgtgcctcaacgtcgaagtcctttctgcggacggcacggcagtgagcctgcgc
gacacggacgacgaggtcttccgtgccgccgaggagctgggcatcaacatctccacgcgc
ttcgagaactcgtcgatcgacgacatctga
DBGET
integrated database retrieval system
