Gloeocapsa sp. PCC 7428: Glo7428_0434
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Entry
Glo7428_0434 CDS
T02400
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
glp
Gloeocapsa sp. PCC 7428
Pathway
glp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
glp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Glo7428_0434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
glp03400
]
Glo7428_0434
Enzymes [BR:
glp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Glo7428_0434
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Glo7428_0434
DNA repair and recombination proteins [BR:
glp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Glo7428_0434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AFZ29035
UniProt:
K9X8S2
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All DBs
Position
complement(486420..487268)
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AA seq
282 aa
AA seq
DB search
MPELPEVETVRRGLNQVTLSQQIMGGDVLLERTIAHPLSIAEFLTGIQGCAIAQWHRYGK
YLLAETQHSSNTASGWLGVHLRMTGQLLWLNQDEELHKHTRVRLFFDNKLELRFVDQRTF
GQMWWVPPEIPVESVITGLAKLGLDPFSPAFSVDYLTQKFKNRQRAIKTALLDQAMVAGL
GNIYADEALFLSQLRPTTLCSELRLPQIEKLRRSIIQVLETSIAAGGTTFSTFLNVQGVN
GKYSGIAWVYNRTGQPCRICQTPIQRIRLAGRSSHFCPNCQQ
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaattacctgaagtagagactgtacgacggggactcaatcaagttaccctgagt
cagcaaattatgggtggagatgtgttgctagaacgcacgatcgcccacccactttctatt
gcagaattcttaacaggaattcaaggatgtgcgatcgcccagtggcatcgttatggtaaa
tacttactagctgaaacgcaacattcttcaaataccgcatccggttggttaggcgtacat
ttgcggatgacaggtcagctattgtggttaaatcaggatgaagaattacataaacatacc
cgcgtcaggctgttttttgataacaagttagagttacgctttgtcgatcaacgcacgttt
ggtcaaatgtggtgggtaccgccagaaattcccgtagaaagcgtcatcacaggtttagct
aaattaggattagatcctttctctccagcgttttcggtcgattacttaactcaaaaattc
aaaaatcgccaacgggcaatcaaaaccgcgcttttagatcaagcgatggttgccggatta
ggtaatatttacgctgatgaagcattgtttctcagccagctacgaccaacaaccctttgt
agcgagttgcgcttaccacagatcgaaaaactgcgccgtagtatcattcaagttctcgaa
acaagtattgccgcaggtggcacaacgtttagtacttttttaaacgtacaaggtgttaac
ggtaaatatagtggtattgcttgggtttacaaccgtactggtcaaccctgtcgcatctgc
cagacgccaattcagcgaattcgactagcgggacgatcttctcacttttgtcctaactgt
cagcaataa
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