KEGG   Glarea lozoyensis: GLAREA_02733Help
Entry
GLAREA_02733      CDS       T04883                                 

Definition
(RefSeq) ATP-dependent DNA ligase DNA-binding protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
glz  Glarea lozoyensis
Pathway
glz03030  DNA replication
glz03410  Base excision repair
glz03420  Nucleotide excision repair
glz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:glz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GLAREA_02733
   03410 Base excision repair
    GLAREA_02733
   03420 Nucleotide excision repair
    GLAREA_02733
   03430 Mismatch repair
    GLAREA_02733
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:glz03032]
    GLAREA_02733
   03400 DNA repair and recombination proteins [BR:glz03400]
    GLAREA_02733
Enzymes [BR:glz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     GLAREA_02733
    6.5.1.6  DNA ligase (ATP or NAD+)
     GLAREA_02733
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     GLAREA_02733
DNA replication proteins [BR:glz03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    GLAREA_02733
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     GLAREA_02733
DNA repair and recombination proteins [BR:glz03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     GLAREA_02733
   NER (nucleotide excision repair)
    Other NER factors
     GLAREA_02733
   MMR (mismatch excision repair)
    Other MMR factors
     GLAREA_02733
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID: 19461789
NCBI-ProteinID: XP_008086009
UniProt: S3CNT6
LinkDB All DBs
Position
Unknown
AA seq 867 aa AA seqDB search
MASPAKKRKLNNDPKLKATPARTLDHFFGKKNSGSSSKIDDSPVVAAENSEVTTSLTDEQ
LARKLQAEWDRESFGASTVWNGDSKERSDGISPKTPNEAIDETRLLSKQARKDIPDLDGI
VATDSVAKPKTKNTLTLQAAGTAEDTLSSSIPFDQSPLTFDPSKYVQELQGHWAADGGNA
SYALLTRCFVLVNSTQSRIKIVDTLVNMLRVIIEADPDSLLPTVWLATNSISPPYISLEL
GLGGSAISKALKNVCGLDSKSLKALYDKVGDAGDVAFEAKKKQSFTLRKPKPLTIKGVYQ
SLVKIANTQGTGSGEVKQRIVDRLLQDARGAEESRYVVRTLCQHLRIGAVKTTMLIALSR
AFLLSKPPGADFPLRSPQQLSTLKKEALAEVWAKPEEIVKACFAKRPNYNDLIPVLLEIG
VCEELLIRCGLALHIPLRPMLGSITRDLSEMLTKLQGRDFSCEYKYDGQRAQVHCDDQGK
VSIFSRHLELMTDKYPDLVDLIPKIRGDGVSSFIMEGEVVAVDQESGELKTFQALSNRAR
KDVAIGSVKVSVCLFSFDLMYLNGESLLSRPFRERRELLRSLFTEVPNRFTWVKSIDATS
QDSETVLEFFKSATDIKCEGIMVKILDNLPNPNLIADVEDTEAADAIEKSARSKTIKKNA
PENVPEKKTRRKALLATYEPDKRLDSWLKVKKDYSTTFDTLDLIPVAAWHGQGRKSQWWS
PILLAVRNEDSGSLEAVCKCISGFTDTFYKANREFYNPGNENTLGSKPGYVEYEGGNPDV
WFEPKEVWEMAFADITLSPVYTAAIGLVSEERGLSLRFPRFLKKREDKGIEEASTNEFLA
GLWRKQEEKAPAAGAKGEIEGGEDDDD
NT seq 2604 nt NT seq  +upstreamnt  +downstreamnt
atggcaagcccagcgaaaaagcggaagttgaataacgacccaaaactaaaagccacgcca
gcgcgaacgcttgatcacttttttgggaagaagaactccggctcatcatcaaagatcgat
gattctcctgttgtagctgcagagaattctgaagtcactacctcattgacggacgagcag
ttggcaagaaaattacaggcagaatgggacagagaatcttttggggcaagcactgtgtgg
aatggcgattccaaggagagaagtgatggaatctcaccgaaaacaccaaacgaagcaatc
gatgagacgcgattgttatcaaagcaggcgcgaaaggacattccggatttggatggcata
gtcgctacagattcggtagccaaaccaaaaactaaaaatacactgaccttacaagcggct
gggacggccgaagatacactttcctctagtatacccttcgaccaaagtcccttgactttc
gatccttcaaaatatgtccaagagttgcaaggacattgggccgcggacggcggcaacgca
tcttacgcccttcttacgagatgttttgtccttgtaaatagcacccaaagccgtatcaag
attgtagacacacttgtcaatatgctgcgagtcattattgaggcagatccagacagtctt
ctgcctacggtgtggttagcgaccaacagtatatcaccgccatacatatcgcttgaactc
ggcctcggtggttctgcaatttctaaagccctcaagaatgtatgtggactggacagcaaa
tcactcaaagctttgtacgacaaggttggggacgctggtgatgttgcctttgaggcgaag
aagaaacagagtttcacgctgcggaagcccaagcctcttacaatcaagggcgtgtatcaa
tctttagtaaagattgctaatactcaaggcactggtagcggagaagtgaagcagagaatc
gtcgatcgactcctgcaagatgccaggggtgcagaagagagtcgatacgtagtccgcaca
ttgtgccagcatcttcgtatcggtgcagtaaagactacaatgttgattgcgctatcaagg
gcatttctgctgtcaaagcctcctggtgcagactttccattaagatcccctcaacagctc
tctacactaaagaaggaagcattggcagaggtgtgggcaaaaccagaagaaattgtcaaa
gcgtgctttgcaaagaggcccaattacaatgatctgattcctgttctgcttgaaattggc
gtttgtgaggagctgctcatcagatgtggattagcattacatattcctctgcggccaatg
ttgggtagcattactcgagatttatcagaaatgctcactaagcttcaaggccgtgacttt
agttgtgagtacaaatacgatggtcagcgtgcgcaagtgcattgcgatgaccagggcaaa
gtgtcaatattctcacgtcacctcgaactcatgaccgacaagtaccccgatcttgtcgat
ctgatacccaagattcgtggagacggtgtttcaagcttcatcatggaaggcgaagtggtt
gctgtggatcaggaatctggcgaactgaaaacatttcaggcactttccaatagggcacgc
aaagatgtagctattggaagtgtaaaggtttccgtttgcttgttttcattcgatctgatg
tatctcaacggagagtcactgctcagccggccttttcgagaacggcgagaattattgaga
agcctgtttacagaagtcccgaaccgcttcacctgggtcaagagcatagatgcaacttca
caagattccgaaaccgttcttgagtttttcaagagcgccacagatatcaaatgcgaaggg
attatggtcaagattcttgacaatcttccaaatcctaatttgatagcagatgtagaagac
acagaggctgcggacgcaatagaaaagtcggcaagatcgaaaacgataaaaaagaacgct
ccagaaaacgtaccagaaaagaagacccggcgcaaggctcttctggcaacctacgaacca
gacaaacgtctcgactcttggcttaaagtcaagaaggactactcaacaaccttcgatacg
ttagatctgattcctgtcgctgcatggcacggacagggacgaaaatcccagtggtggtct
cctatccttcttgcagtacgcaatgaagactctggatctctcgaagcggtctgcaaatgc
atatccgggttcacggacacgttctacaaagctaatcgcgaattctataatccgggtaac
gagaacacattaggctcaaaaccaggttacgtcgaatatgagggaggcaacccggatgta
tggtttgagccaaaagaggtctgggagatggcgtttgcggacattacgttgagtccggta
tacacggcggctattggattggtttccgaggagagggggttgagtctgagatttccgaga
ttcttgaagaagagggaagataaggggattgaggaagctagtacgaatgagtttctagct
ggcttgtggaggaagcaggaggagaaggctccagctgctggtgcgaagggtgagattgag
ggaggcgaggatgatgatgattag

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