Geobacter metallireducens: Gmet_0004
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Entry
Gmet_0004 CDS
T00295
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
gme
Geobacter metallireducens
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gme03032
]
Gmet_0004 (gyrB)
03400 DNA repair and recombination proteins [BR:
gme03400
]
Gmet_0004 (gyrB)
Enzymes [BR:
gme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Gmet_0004 (gyrB)
DNA replication proteins [BR:
gme03032
]
Prokaryotic type
DNA Topoisomerases
Gmet_0004 (gyrB)
DNA repair and recombination proteins [BR:
gme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Gmet_0004 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
ABB30254
UniProt:
Q39ZS0
LinkDB
All DBs
Position
4149..6536
Genome browser
AA seq
795 aa
AA seq
DB search
MADELNNDYGADKIKVLEGLEAVRKRPAMYIGSTASQGLHHLVYEIVDNSIDEALAGYCN
EVNVTIHLDGSITVVDNGRGIPTEMHPTEGKPAAEVALTVLHAGGKFDNTSYKVSGGLHG
VGVSVVNALSKKLELGIRRDGKVFQQSYAYGAPLTPLEIVGETKKRGTRITFLPDDTIFE
TTEFSFDILSQRLRELAFLNAGVRITISDEREEGKHHDFHYEGGIVSFVEYLNRNRTVLH
PKPVYFRGERAGIDMEIAIQYNDSYDEKVFTFANNINTHEGGTHLVGFRAALTRSMNSYA
AANELTKKEKVSISGEDLREGLTAVISVKIPQPQFEGQTKTKLGNSEVKGFVESLMNEQL
AVFLEENPKIAKDIIGKSIEAARAREAARKARELTRRKSALDISSLPGKLADCQERDPAL
CELYLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKARFDKMLSSQEIGTLITALGTS
IGKEDFDVAKLRYHRIIVMTDADVDGSHILTLLLTFFFRQMPEVVERGHLYIAQPPLYKV
KRGRKELYLRNEAAMQAYLLEEGTEDMVLFLENGEKTYTGKQIIPILKQLVEYRTILDKV
VRKGINEELIRVFLRLGVKAGIEDMEQLVPYLANISRVYEGGDSSPLDDGRAIVRLGNLR
IALDQHTLDIIGSYEYGLLAESFRKVREMFGDGRAVVSSEGKELFATAIGLDLLSFFMDS
AKKGLSIQRYKGLGEMNPDQLWETTMEPTNRTLLQVKIEDAIEADTIFTILMGDQVEPRR
DFIEKNALNVSNLDI
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaactgaacaacgattacggagcggacaagatcaaggtccttgaggggctc
gaagctgttcgcaagcgccccgccatgtacatcggctcaaccgcgagccaggggctccac
catctggtctacgagattgtcgataactccatcgacgaggccctggccggctactgcaac
gaggtgaacgtcaccatccacctggacggctccattacggtggtggacaacggccggggt
attcccaccgagatgcatcccactgaagggaaaccggcggcggaggtggcccttacggtt
ctccatgccggcggtaagttcgataatacgtcatacaaggtgtccggcggtctccacggg
gtcggcgtatcggtcgttaacgccctgtcgaaaaagcttgaactgggaattcgccgtgac
gggaaggtgtttcagcagtcctatgcctacggagcaccgctgactcccctggaaattgtg
ggggagaccaagaaacggggaaccagaatcactttcctccccgacgacaccatcttcgag
accacggaattttccttcgatattctttcccagcggctgcgggagctggccttcctgaac
gccggggtgcggatcaccatctccgacgagcgggaagagggtaaacaccacgactttcac
tacgaggggggaatcgtctccttcgtggagtacctgaaccggaaccgaaccgtgctccat
ccgaaaccggtctacttccggggtgagagggcggggatcgacatggagatcgccatccag
tacaacgactcctacgacgagaaggttttcacctttgccaacaacatcaacacccacgag
ggtggtacccacctggtggggttccgggcggcactcacccgctccatgaactcctacgcc
gcggccaacgagctgacgaagaaggagaaggtctccatctccggcgaggatctgcgggag
gggctcacggcggtaatctcagtcaagattccccagccccagttcgaggggcagaccaag
accaagcttgggaactccgaggtgaaggggttcgtggaatccctcatgaacgagcagctg
gcggtcttcctggaggagaacccgaagatcgccaaggacatcatcggcaaatccatcgaa
gcggcccgggccagggaagcggcccgaaaggcccgggagctgacccggcgtaaaagtgcc
ctggacatctccagcctccccggcaagctggccgactgccaggagcgggacccggccctc
tgtgagctctatctcgtcgagggtgactccgccggcggctccgccaaacagggacgggac
cggaagttccaggcgatcctgccgctcaaggggaagatcctcaacgtggagaaagcccgg
ttcgacaagatgctctcctcccaggagataggcaccctgatcacggccctgggtaccagc
atcggcaaggaagacttcgacgtggcgaagctccgctaccaccggatcatcgtcatgacc
gacgccgacgtggacggctcccacatcctgacgctgcttctcaccttcttcttccggcag
atgccggaggtggtggagcgggggcacctctacatcgcccagccgccgctctacaaggtg
aagcggggccgcaaggagctctatctccgcaacgaggcggccatgcaggcttacctcctg
gaggaggggaccgaggatatggtcctcttcctggagaatggcgagaagacctacaccggc
aagcagatcatcccgattctcaagcagctggtggagtaccggaccattctggacaaggtg
gtgcgcaaggggatcaatgaggagctcatccgggtctttctgcggctcggggtcaaggcc
ggcatcgaggacatggagcagctggtgccgtacctggcgaacatctcccgggtctacgag
gggggtgattccagccccctggacgacgggcgggccatcgtgcggctcggcaacctccgg
attgccctggaccagcacactctcgacatcatcggatcctacgagtacgggctcctggcc
gaaagcttccggaaggtcagggagatgttcggcgacggccgggccgtggtctccagcgag
gggaaggagctcttcgccaccgccatcgggctcgacctcctctccttcttcatggactcc
gccaagaaggggctctccatccagcgctataaaggtctcggcgagatgaacccggaccag
ctctgggagacgaccatggagcccaccaaccggacgctcctccaggtgaagatcgaggac
gccatcgaggccgacaccatctttaccatcctcatgggagaccaggtggagccccgccgg
gacttcatcgagaagaacgccctgaacgtgtcgaacctcgacatctga
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