KEGG   Geobacter metallireducens: Gmet_0004
Entry
Gmet_0004         CDS       T00295                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
gme  Geobacter metallireducens
Brite
KEGG Orthology (KO) [BR:gme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gme03032]
    Gmet_0004 (gyrB)
   03400 DNA repair and recombination proteins [BR:gme03400]
    Gmet_0004 (gyrB)
Enzymes [BR:gme01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Gmet_0004 (gyrB)
DNA replication proteins [BR:gme03032]
 Prokaryotic type
  DNA Topoisomerases
   Gmet_0004 (gyrB)
DNA repair and recombination proteins [BR:gme03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Gmet_0004 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 Prot_ATP_ID_OB_C
Other DBs
NCBI-ProteinID: ABB30254
UniProt: Q39ZS0
LinkDB
Position
4149..6536
AA seq 795 aa
MADELNNDYGADKIKVLEGLEAVRKRPAMYIGSTASQGLHHLVYEIVDNSIDEALAGYCN
EVNVTIHLDGSITVVDNGRGIPTEMHPTEGKPAAEVALTVLHAGGKFDNTSYKVSGGLHG
VGVSVVNALSKKLELGIRRDGKVFQQSYAYGAPLTPLEIVGETKKRGTRITFLPDDTIFE
TTEFSFDILSQRLRELAFLNAGVRITISDEREEGKHHDFHYEGGIVSFVEYLNRNRTVLH
PKPVYFRGERAGIDMEIAIQYNDSYDEKVFTFANNINTHEGGTHLVGFRAALTRSMNSYA
AANELTKKEKVSISGEDLREGLTAVISVKIPQPQFEGQTKTKLGNSEVKGFVESLMNEQL
AVFLEENPKIAKDIIGKSIEAARAREAARKARELTRRKSALDISSLPGKLADCQERDPAL
CELYLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKARFDKMLSSQEIGTLITALGTS
IGKEDFDVAKLRYHRIIVMTDADVDGSHILTLLLTFFFRQMPEVVERGHLYIAQPPLYKV
KRGRKELYLRNEAAMQAYLLEEGTEDMVLFLENGEKTYTGKQIIPILKQLVEYRTILDKV
VRKGINEELIRVFLRLGVKAGIEDMEQLVPYLANISRVYEGGDSSPLDDGRAIVRLGNLR
IALDQHTLDIIGSYEYGLLAESFRKVREMFGDGRAVVSSEGKELFATAIGLDLLSFFMDS
AKKGLSIQRYKGLGEMNPDQLWETTMEPTNRTLLQVKIEDAIEADTIFTILMGDQVEPRR
DFIEKNALNVSNLDI
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggctgacgaactgaacaacgattacggagcggacaagatcaaggtccttgaggggctc
gaagctgttcgcaagcgccccgccatgtacatcggctcaaccgcgagccaggggctccac
catctggtctacgagattgtcgataactccatcgacgaggccctggccggctactgcaac
gaggtgaacgtcaccatccacctggacggctccattacggtggtggacaacggccggggt
attcccaccgagatgcatcccactgaagggaaaccggcggcggaggtggcccttacggtt
ctccatgccggcggtaagttcgataatacgtcatacaaggtgtccggcggtctccacggg
gtcggcgtatcggtcgttaacgccctgtcgaaaaagcttgaactgggaattcgccgtgac
gggaaggtgtttcagcagtcctatgcctacggagcaccgctgactcccctggaaattgtg
ggggagaccaagaaacggggaaccagaatcactttcctccccgacgacaccatcttcgag
accacggaattttccttcgatattctttcccagcggctgcgggagctggccttcctgaac
gccggggtgcggatcaccatctccgacgagcgggaagagggtaaacaccacgactttcac
tacgaggggggaatcgtctccttcgtggagtacctgaaccggaaccgaaccgtgctccat
ccgaaaccggtctacttccggggtgagagggcggggatcgacatggagatcgccatccag
tacaacgactcctacgacgagaaggttttcacctttgccaacaacatcaacacccacgag
ggtggtacccacctggtggggttccgggcggcactcacccgctccatgaactcctacgcc
gcggccaacgagctgacgaagaaggagaaggtctccatctccggcgaggatctgcgggag
gggctcacggcggtaatctcagtcaagattccccagccccagttcgaggggcagaccaag
accaagcttgggaactccgaggtgaaggggttcgtggaatccctcatgaacgagcagctg
gcggtcttcctggaggagaacccgaagatcgccaaggacatcatcggcaaatccatcgaa
gcggcccgggccagggaagcggcccgaaaggcccgggagctgacccggcgtaaaagtgcc
ctggacatctccagcctccccggcaagctggccgactgccaggagcgggacccggccctc
tgtgagctctatctcgtcgagggtgactccgccggcggctccgccaaacagggacgggac
cggaagttccaggcgatcctgccgctcaaggggaagatcctcaacgtggagaaagcccgg
ttcgacaagatgctctcctcccaggagataggcaccctgatcacggccctgggtaccagc
atcggcaaggaagacttcgacgtggcgaagctccgctaccaccggatcatcgtcatgacc
gacgccgacgtggacggctcccacatcctgacgctgcttctcaccttcttcttccggcag
atgccggaggtggtggagcgggggcacctctacatcgcccagccgccgctctacaaggtg
aagcggggccgcaaggagctctatctccgcaacgaggcggccatgcaggcttacctcctg
gaggaggggaccgaggatatggtcctcttcctggagaatggcgagaagacctacaccggc
aagcagatcatcccgattctcaagcagctggtggagtaccggaccattctggacaaggtg
gtgcgcaaggggatcaatgaggagctcatccgggtctttctgcggctcggggtcaaggcc
ggcatcgaggacatggagcagctggtgccgtacctggcgaacatctcccgggtctacgag
gggggtgattccagccccctggacgacgggcgggccatcgtgcggctcggcaacctccgg
attgccctggaccagcacactctcgacatcatcggatcctacgagtacgggctcctggcc
gaaagcttccggaaggtcagggagatgttcggcgacggccgggccgtggtctccagcgag
gggaaggagctcttcgccaccgccatcgggctcgacctcctctccttcttcatggactcc
gccaagaaggggctctccatccagcgctataaaggtctcggcgagatgaacccggaccag
ctctgggagacgaccatggagcccaccaaccggacgctcctccaggtgaagatcgaggac
gccatcgaggccgacaccatctttaccatcctcatgggagaccaggtggagccccgccgg
gacttcatcgagaagaacgccctgaacgtgtcgaacctcgacatctga

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