Geobacter metallireducens: Gmet_2006
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Entry
Gmet_2006 CDS
T00295
Symbol
sufS
Name
(GenBank) selenocysteine lyase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
gme
Geobacter metallireducens
Pathway
gme00450
Selenocompound metabolism
gme01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Gmet_2006 (sufS)
Enzymes [BR:
gme01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Gmet_2006 (sufS)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Gmet_2006 (sufS)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DUF6325
Motif
Other DBs
NCBI-ProteinID:
ABB32235
UniProt:
Q39U39
LinkDB
All DBs
Position
complement(2244290..2245477)
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AA seq
395 aa
AA seq
DB search
MDIQKIRGDFPIFERRINGKPIVYFDSAATTQKPRQVIDTLSNYYANHCANIHRGVHTLS
QESSELYEEARRTVARFINADEREIVFVRNTTEAINLVSTCLKGEGQILSTVTEHHSNLL
PWGRSRKVDYVDIDAQGRIDVADLKEKLLKPTLLVAVTHVSNVLGLVNPVEEVIAEARKN
GALTLVDAAQSAPHMEIDVKAMGCDFLVFSGHKMLAPSGIGVLYVREELYERMEPYLMGG
STIKEAHLGSYVPEEPPTCYEAGTPNIEGAIALASAIDYLNDIGMDNVLAHDKALMALAL
ERMKAIDNVELYGSLDPTDRLSVITFNVKGMGCHGVAKVLNLRENIMIRSGFHCAQPLHD
RLGIGPTARMSFYIYNTPEEIELAAELLGKIAEFM
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggacattcagaaaatcaggggagatttccccatctttgagaggcgcatcaacgggaag
ccgatagtctatttcgacagcgccgccacgacccagaagcctcgccaggtgatcgatacg
ctttcgaactactacgcgaaccactgcgccaatatccaccgcggggtgcacaccctttcc
caggagtcgtcggagctctatgaggaagcgcgccggaccgttgcccgtttcatcaatgcc
gacgagcgggaaatcgtctttgtcaggaacacgaccgaagcgatcaatctggtaagcacc
tgcctgaagggggaggggcagattctgtccaccgttaccgagcaccactcgaatctcctt
ccgtggggacgttcacggaaggtagactatgtggatatcgacgcccaggggcggatagat
gtggcggatctgaaggaaaaattgctgaaaccgacgctcctggtcgcggtgacccacgtc
tccaacgtacttggtctggtcaatccggtggaagaggtgatagccgaggcgcggaaaaac
ggggcgctgacactggttgatgcggcccagtcggcgccgcacatggagatcgacgtcaag
gcgatgggatgcgatttcctggttttcagcgggcacaagatgctggcgccctcgggtatc
ggcgtcctctatgtgcgggaagagctctatgagcggatggaaccgtatctcatggggggg
agcaccatcaaggaggcccacctgggaagttatgttcctgaggaaccccccacctgctat
gaggcgggaacgcccaacatcgagggtgctattgcgctggccagcgccatcgactacctg
aacgacatcggcatggacaacgtgctggcccacgacaaggccttgatggcgttggccctg
gagaggatgaaggccatcgacaatgtagaactatacggcagcctcgatcccacggaccgg
ctctccgtcatcaccttcaatgtcaaggggatggggtgccacggcgtggccaaggtgctg
aacctgcgggagaacatcatgatccgctcgggcttccactgcgctcaaccgctccatgac
cggctcggcatcgggccgacggcgcggatgtccttctatatctacaatacgcctgaagag
atcgagcttgcggcggagcttctcgggaagattgcggagtttatgtga
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