Geobacter metallireducens: Gmet_2607
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Entry
Gmet_2607 CDS
T00295
Symbol
lpxC
Name
(GenBank) UDP-3-O-(3-hydroxyacyl)-N-acetylglucosamine/UDP-3-N-(3-hydroxyacyl)-2-N-acetylglucosediamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
gme
Geobacter metallireducens
Pathway
gme00540
Lipopolysaccharide biosynthesis
gme01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Gmet_2607 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gme01005
]
Gmet_2607 (lpxC)
Enzymes [BR:
gme01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
Gmet_2607 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
gme01005
]
Lipid A
Gmet_2607 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
ABB32826
UniProt:
Q39SE8
LinkDB
All DBs
Position
complement(2955707..2956534)
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AA seq
275 aa
AA seq
DB search
MIKRQTTINRIFKLSGIGLHTGRTVTLEFLPRREFGIAFVFGGSLIPARYDMVADTRLST
QIAAEGASVATIEHLMAAFYYSGITNCLVYIDGPEVPIMDGSAWEFYHEMWRAGVYEFPE
AGVYLKVLRPVEATLKDAWVRVKPLNTLDITMTIEFRPPVGKQRKRVMDVENAVSIINSR
TFVLHEEIEAIRKAGLAKGGSLDNAVVIGGESIVNPHGLRYKQELVNHKILDLIGDLYTC
GYRMLGKVEAHKTGHHLNNLLLREIFSDPENYAIY
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgacagacgaccatcaatagaatcttcaagctgagcggcataggcctccac
acggggcggaccgtgaccctcgaatttcttccccggcgggagttcgggatagcctttgtc
ttcggcggcagccttatcccggcccgctacgacatggtggcggacacgcggctctctacc
cagattgccgccgagggggcgtcggtggccaccatcgagcacctgatggccgccttctat
tactcgggcatcaccaactgtctcgtctacatcgacggtcccgaggtgccgatcatggac
ggctcggcctgggagttctaccatgagatgtggcgggccggggtctacgagtttcccgag
gcaggggtctacctgaaggtcctccgtcccgtggaagccaccctcaaggatgcctgggtg
cgggtgaagcccctcaacaccctcgacatcaccatgaccatcgagttccgccccccggtg
gggaagcagcgcaagcgggtcatggacgtggagaatgccgtttccatcatcaattcccgc
acctttgtcctccacgaggagatcgaggcgatccgcaaggcggggctggccaagggggga
tccctggacaacgccgtggtgatcggcggcgagagcatcgtcaatccccatggcctgcgc
tacaagcaggagctcgtgaaccacaagatcctggaccttatcggagacctctacacctgc
ggctaccggatgctcggcaaggtcgaggcgcacaagaccggccaccacctgaacaacctg
ctgttgcgggagattttttccgaccccgagaactacgccatctattga
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