Gemella morbillorum: NCTC11323_01041
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Entry
NCTC11323_01041 CDS
T05494
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
gmo
Gemella morbillorum
Pathway
gmo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gmo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC11323_01041 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmo03021
]
NCTC11323_01041 (rpoB)
03400 DNA repair and recombination proteins [BR:
gmo03400
]
NCTC11323_01041 (rpoB)
Enzymes [BR:
gmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC11323_01041 (rpoB)
Transcription machinery [BR:
gmo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC11323_01041 (rpoB)
DNA repair and recombination proteins [BR:
gmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC11323_01041 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
SQH55570
UniProt:
A0A2X4N7L9
LinkDB
All DBs
Position
1:complement(1032194..1036012)
Genome browser
AA seq
1272 aa
AA seq
DB search
MQKVKFGKHRQRRSYARISEVIDLPDLIEIQTLSYEKFLETGIKEVFRDVSPIEGNNDKL
SLEFIDYKLGTPKYSVDESKERDATYSAPLRVRVRLINKERDEIKEQEVFMGELPLMTET
GTFIINGAERVIVSQLVRSPSVYFTEDDKLKIKNIPNAYKTTVIPNRGAWLEFEKDIKGL
AYARIDRTRKIPLTTLIRALGFESDEAIVKLFGEDTELLNTLEKDENLDTGTALKVIYDK
LRPGEPANVETAKATLHGRFFDPRRYDLAKVGRYKLNNKLHVGERLENQILVEPIVDTET
GEILVEKGTKLTREIIDGIYEELGTTANVVEFDMNESLDGTDSLKLQLFKVVNQVKVGNE
FNIDELTNDQILHVIGNGAPNKDILTLTIADIVASINYYLLLIRNRRNSDGFEYELIGRV
DDIDHLGNRRLRCIGELLQNQIRVGISRMERVVRERMSIQDTNEITPQQLINVRPVTAII
KEFFGSSQLSQFMDQTNPLSELTHKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIE
TPEGPNIGLINSLSSFARINEFGFIMTPYRKVEVDKDGRPYVTENVQYLTADQEDKYVVA
QSNSNIDKNGYFLDDEVVCRFRGDNTVKPKEMMNYMDVSPKQVVSAATACIPFLENDDSN
RALMGANMQRQAVPLMLTEAPFVGTGMEHLAARDSGAAVIAKYPGIVEYVDGAKIKVRRI
ETLDGKEIQGDLDTYVVHKFVRSNHSTSYNQKPIVKVGDRVEPKDILADGPSMDKGELAL
GKNLVVAFVNWDGYNYEDAVIMSERLVKDDVYTSIHVEEYETDARDTKLGPEEITREIPN
VGENALRNLDARGIIRIGAEVKDGDILVGKVTPKGLTEQTPEEKLLYAIFGAKSKEVRDT
SLRVPHGADGVVADVKIFKREDGAELANGVNELVRVFIVQKRKIRVGDKMAGRHGNKGVI
SNILPEEDMPYLPDGTPVDVMLNPLGVPSRMNIGQVLELHLGMAAKQLGIHVATPVFDGA
NDDDVWATIAEAGMAKDAKTVLYDGRTGEPFDSRVSVGVMYMIKLAHMVDDKLHARSIGP
YSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTYKSDDTNGRVKTYEAIVK
GENIPRPGVPESFRVLMKELQALGMDFRVMDKDDNEVDMGDIDLGDTIEYHGSHENKEND
KENDVQEESKAESDETSGYENLANLLLSDIDEYDDVEEDSEPSEESSGYAALADILLSDI
DEYADVEDTDEE
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaagttaaatttggtaagcacagacaaagacgtagctatgctagaatatcagag
gtaattgatttaccggacttaattgagattcagacattatcttatgaaaaatttttagaa
actggtataaaagaagtttttagagatgtttcaccaattgaaggtaataatgataaatta
agcttagaattcattgattataaattaggaactcctaaatacagtgttgatgaatctaag
gaacgtgatgctacatattcagcacctttaagagtgcgagtacgtttgattaataaagaa
cgtgacgaaattaaagaacaagaagtatttatgggtgagttaccattgatgacagaaact
ggaacgtttattatcaatggagcagagcgtgtaattgtatctcaattagtgcgttcacct
tctgtttactttacagaagacgataaattaaaaattaaaaatattcctaatgcttataaa
acaactgttattcctaacaggggtgcttggttagagtttgagaaagatataaaaggtcta
gcatacgctcgtatagatagaactagaaaaatacctttgacaacgcttattagagcacta
ggttttgaatctgatgaagcaatagttaaattgtttggtgaggatacagaacttctaaat
actttggaaaaagatgaaaacttagacacaggaacagcattaaaagttatttacgataaa
ctacgtccaggagagcctgcaaacgtagagacagcgaaagctacattacacggtcgtttc
tttgacccaagaagatacgatttagctaaagtagggcgctataaattaaataataaactt
catgttggagaaagattagaaaaccaaattctagtagaaccaatcgttgatacagaaaca
ggtgaaattttagtagaaaaaggaactaaattaactcgtgaaattattgatggtatctat
gaggaactgggaactactgctaacgttgtagagtttgatatgaatgaatcattagatggg
actgatagtttgaaattacaacttttcaaagttgtaaatcaagttaaagttggtaatgag
tttaacatagatgaacttactaatgatcaaatccttcatgttatcggtaatggtgcacca
aacaaagatatattaacattaacaatcgcagatatcgttgcaagtatcaactactattta
ttattaataagaaatagaagaaacagtgatggtttcgagtatgaattaattggtcgcgtt
gatgatattgaccaccttggtaatcgtcgtcttcgttgtattggagaattattacaaaat
caaattcgtgttggtatttctcgtatggagcgtgttgtacgtgagcgtatgagtattcaa
gatactaatgaaattacacctcaacaattgattaatgttcgcccagtaacggcaattatt
aaagaattctttggaagttctcaactttcacaattcatggaccaaactaacccattaagt
gagcttactcacaaacgccgtttatcagcgcttgggcctggtggtttaacgagagaacgt
gcaggaatggaagtgcgtgacgttcactattcacactatggtcgtatgtgtccaattgaa
acgccagagggtcctaatatcggattgattaactcactgtcatcatttgcccgtattaat
gaatttggatttataatgactccatatagaaaagtagaagttgataaagatgggcgtcca
tatgtaacagaaaatgttcagtatttaacagctgatcaagaagataaatacgtagtagca
caatcaaattcaaatatagataagaatggatatttcttagacgatgaagtagtttgtcgt
tttagaggagacaacacagttaaaccaaaagaaatgatgaattatatggatgtttctcca
aaacaagtagtatcagctgcaacagcatgtatacccttcttagaaaatgacgactctaac
cgtgcgctaatgggagcgaacatgcaacgtcaagcagtgcctttaatgttaacagaggca
ccatttgttggaacaggaatggagcatcttgcagcacgagactcgggagctgcagtaatt
gctaagtatcctggtattgtagagtatgtagacggagctaaaattaaagttcgtcgaatt
gaaactttagatggaaaagaaatacaaggtgatttagatacttatgtagttcataaattt
gttcgttctaaccatagtacatcatacaatcaaaaaccaattgtaaaagttggtgataga
gtagaacctaaagatattcttgctgatggtccttctatggataaaggtgaattagcctta
ggtaaaaacttagttgtagcattcgtaaactgggatggatataactatgaggatgctgtt
attatgagtgaacgtcttgtaaaagatgatgtttatacttctattcacgtggaagaatat
gaaacagatgcgcgagatacaaaattaggaccagaagaaattacaagagaaattcctaat
gtaggggaaaacgcattaagaaatcttgatgcacgtggtattattcgtattggtgctgaa
gttaaagacggagatatcttagttgggaaagtaactccaaaaggattaactgaacagact
ccagaagaaaaattattatatgccatttttggtgcgaagtctaaagaagtacgtgatact
tcattacgtgtaccacacggagcagacggagtagtagcagatgttaaaattttcaaacgt
gaagacggagcagaattagctaacggcgtaaatgaacttgttcgagtatttatcgttcaa
aaacgtaagattcgtgttggggataaaatggccggtcgtcatggtaacaaaggggttatc
tctaatatcttacctgaagaagacatgccatatttaccagatggaacacctgtagatgtt
atgttaaacccactaggggtaccatctcgtatgaatattggacaagtattagagcttcac
ttaggaatggctgctaaacagttgggtattcatgttgctactccagtatttgacggggct
aatgatgatgatgtttgggcaactatcgcagaagcaggaatggctaaagatgccaagact
gttctttatgatggacgtacaggtgaaccatttgacagccgtgtatctgttggtgtaatg
tacatgattaaacttgcacacatggttgatgataaacttcacgcacgttcaattggacca
tactcattagttactcaacaaccattaggtggtaaagcacaatttggtggacaaagattt
ggtgagatggaggtatgggcattagaagcttatggggctgcttatactcttcaagaaatt
ttaacatacaaatcagatgatactaacggtcgagtgaaaacatatgaagctatcgttaaa
ggtgaaaatattccaagacctggagtgcctgaatcattccgtgttcttatgaaagaacta
caagctttaggtatggactttagagtaatggataaagatgataacgaagtggatatgggt
gatattgatttaggagatactatagaatatcatggttctcatgagaataaagaaaacgat
aaggaaaatgatgtgcaagaagaatcaaaagctgaaagcgatgagacttcaggttatgaa
aatttagctaacttattattatcagatatagatgagtatgatgatgtagaagaagatagt
gagccaagcgaagaatcttcaggttatgcggctttagctgatatattactatcagatata
gatgaatatgccgatgtagaagatactgatgaagaataa
DBGET
integrated database retrieval system
