Gimesia maris: GmarT_10630
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Entry
GmarT_10630 CDS
T06180
Name
(GenBank) 2',5' RNA ligase family
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
gmr
Gimesia maris
Brite
KEGG Orthology (KO) [BR:
gmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmr03016
]
GmarT_10630
Enzymes [BR:
gmr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GmarT_10630
Transfer RNA biogenesis [BR:
gmr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GmarT_10630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QEG15224
LinkDB
All DBs
Position
complement(1324818..1325390)
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AA seq
190 aa
AA seq
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MMHTNQRTRTFIAIPIQPPRGLKKLMPRLEKLAPAVKPIDVEQMHITLKFLGPTELEDIM
PVSRILKEMRSRFKRIKLAFKGLGAFPREDHPNVIWAGISDAEALLEMVEYLEEETQKLG
YPRERKGFHPHLTLARVKAKPADELFDILRDRKHAEWGEVIVDTIKFFQSELKTPQARYH
EMQTVKLPQR
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgatgcataccaatcagcgcacacgcacctttatcgccattcccatccagcctccccgt
ggactgaaaaagctgatgccccgcctggaaaagctggcaccggctgtcaaacccattgat
gtcgaacagatgcatatcacgctgaagttcctcggaccgacggaactggaagacatcatg
cccgtcagcagaattctgaaagagatgcgcagccgcttcaagcgaatcaaactggccttc
aaagggctgggcgcgtttccccgggaagaccatccgaacgtcatctgggccggcatctcg
gatgcagaggccctgctggaaatggtcgaatacctggaagaagaaacccagaagctgggc
tacccccgcgagcgaaaaggttttcatccccatctgacactagcccgcgtcaaagccaaa
cctgccgacgaactgttcgacatcctgcgggatcgtaagcatgccgaatggggggaagtg
attgtggatacgatcaagtttttccagtcagaactcaaaacgccgcaggcccgctatcac
gaaatgcagacggtcaaactgcctcagcgttga
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