KEGG   Glycine max (soybean): 100779425
Entry
100779425         CDS       T01710                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
gmx  Glycine max (soybean)
Pathway
gmx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100779425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gmx03021]
    100779425
Enzymes [BR:gmx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     100779425
Transcription machinery [BR:gmx03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     100779425
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77 DUF2002
Other DBs
NCBI-GeneID: 100779425
NCBI-ProteinID: XP_003527775
UniProt: I1K8M4
LinkDB
Position
6:complement(4613989..4619534)
AA seq 1205 aa
MGHVGSSKDGTEAGPSAAAMGIDDDEDIDLGDVDLDPTNAEILEELGEDIVKYWCKKASM
LFFNEYGLISHQINSFNHFIHTGLQKTFESFGDLVVTPGFDPSKKGENEHFRYASVKFGN
VKLDKPMFWGGEGNAQEFKMLPRHARIQRMTYASKVKIQVKVQVYVPKKVRSDKFKTGKA
EFLDREVMKEDEREIIIGRLPVMVKSDLCWMKEAEKEDDEFDHGGYFIVKGAEKTFIAQE
QLYLKRLWVMNSPGWMIAYKSQMKRNRMVIKLVGNSRGEEVENGDMSLAVYFLSVEVPVW
VLFFALGVSSDKEIVDLIGCGNDDVRIQNILFASVRDADEKCGAFRRGRHAVQYLEKCVK
SVQFPPSESMQECLEMYVFPGISGLNRKARFLAYMVKGLLLAYTGRRKCDNRDDFRNKRL
ELASELLDRELKVHIAHARKRMAKALQRDLYGDRDVRPIEHYLDASIITNGLQRAFSTGA
WSHPYKRMERISGVVANVGRTNPLQTMAELRRARQQVQYTGKVGDARYPHPSHWGKVCFL
STPDGENCGLVKNLAVTGLVSTDVSAVSEYILPKLLDCGMEELVDDTSTHLGNKDKVLLN
GDWVGVCPDSSSFVAELRSRRRRNELPHQVEIKRDQSQHEVRIYSDAGRILRPLLVVGNL
LKIKGFKSDCNSFQSLLDKGVIELIGPEEEEDCCTAWGVEYLFGKEGKRSVKYTHCELDM
SFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTTNPNIRVDTLSHQLHYPQKPLF
RTMASDCLGKPDNSLGQNKISKIPPKAEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQR
GMFRSEHIRSYKSEIDNKESSDKKRKPEDIVNFAKLQSKIGRVDSLDDDGFPYVGANLQS
GDIIIGKGAESGADNSVKLKHTERGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLGDKFSS
MHGQKGVLGFLESQENFPFTRQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGILR
QATPFSTPSVDAITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDK
VKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHI
CSKCKNVANVILRPVSGGRKIRGPYCRHCESADDIVVAHVPYGAKLLCQELFSMGINLKF
ETQLC
NT seq 3618 nt   +upstreamnt  +downstreamnt
atgggtcacgtaggttccagcaaggacggcaccgaggctgggccttccgccgccgcgatg
ggcatcgacgacgacgaagacatcgacctcggcgacgtcgatctcgacccgaccaacgcc
gaaatcctcgaagagctcggtgaagacattgtgaaatactggtgcaagaaagcgtcgatg
ctcttcttcaacgagtacggtctgatcagccaccagatcaactcctttaaccacttcatc
cacacaggcctccaaaaaaccttcgaatccttcggagacctagtcgtaacgcccgggttc
gacccttccaagaagggagaaaacgaacacttccgttacgcctccgttaagttcggcaat
gtgaagctcgataaacctatgttctggggcggtgaagggaacgcgcaggagtttaagatg
cttcccagacacgcgagaatccagaggatgacctacgcttccaaagtcaaaatccaagtt
aaagttcaggtgtatgttccgaagaaggtacggagtgataagttcaagactgggaaagcg
gaattccttgacagggaggttatgaaggaagacgagagggaaatcatcattgggagattg
ccagtcatggtcaagtctgatttatgctggatgaaagaggcggagaaggaggatgatgaa
tttgaccatggaggttattttatcgttaagggtgcagagaagacttttattgcacaggag
caactgtatttaaagaggctatgggttatgaatagtccaggttggatgattgcctacaag
tcacagatgaagagaaacaggatggttattaaactggtaggaaattccaggggtgaagaa
gtggagaatggggacatgtctcttgctgtatattttttgtctgttgaggttcctgtgtgg
gtactgtttttcgctctcggtgtctcatctgacaaagagattgtagatctcattggttgt
ggcaatgatgatgtcagaattcagaatattctctttgcatctgttcgggatgctgatgag
aaatgtggagcatttcgaagaggtaggcatgcagttcaatatttagaaaaatgtgtaaaa
agtgttcaatttccaccttcggagtctatgcaggagtgccttgaaatgtatgtcttccct
ggaattagtggtttgaatagaaaggcgcgcttccttgcatatatggtgaaaggtctcttg
ctggcttatactggccgccgaaaatgcgacaacagggatgattttcgaaataagaggctt
gaattggccagtgagcttcttgaccgtgagttgaaagtgcacattgcacatgcccggaag
cgaatggcaaaagctttgcagagagacctttatggagatagggatgtacgcccaattgag
cattatctcgacgcgtccataattacaaatggcttgcaaagggcattttcaacaggagcg
tggtctcatccatacaagaggatggaaaggatctcaggtgtggttgcaaatgttgggcgc
actaatcccttacaaaccatggctgagttaagaagagcgaggcagcaggtccagtacaca
ggaaaagttggggatgctagatatccgcatccttctcactggggcaaggtttgtttcctc
tctaccccagatggtgaaaattgtggactagtaaaaaatttggctgtcacaggattagta
agtactgatgtatcggcagtatctgaatatatactgcctaaattgctggattgtggaatg
gaagaacttgttgatgatacttccactcatcttgggaacaaggacaaagttctcctaaat
ggcgattgggttggagtgtgtcctgattccagttcatttgtggcagagctacgaagcaga
agacgtagaaatgaactgcctcatcaggtggaaatcaagagagaccaatctcaacatgaa
gtgcgcatatactcggatgcaggaaggattctacgtcctcttttggtggttggtaatcta
ctcaagattaaaggatttaaatcagactgtaactctttccagtctctattggataaaggt
gtgattgagctgattggaccggaagaagaggaagactgttgtacagcctggggtgttgag
tatttatttggaaaagaaggaaaacgatctgtaaagtacactcattgtgaacttgatatg
tcattcttattgggtttaagctgttcacttgtaccatttgctaatcatgaccatgcgagg
agggtactctaccagtctcagaagcactcctcacaggcaattggcttttctacaacaaac
ccgaacattagagttgatactttgtctcaccagttacactatccccaaaagccccttttt
cgaacaatggcttcagattgtcttggaaaaccagacaattcacttggtcaaaataaaata
agtaaaatacctccaaaggcagaattctataatgggcagaatgcaattgtggctgttaat
gtacatctgggatacaatcaagaggattcccttgtgatgaaccgtgcttcactgcagcgt
ggtatgttcaggtctgagcacataaggagttacaaatctgaaatcgataataaggaatct
tcagataagaagcgaaaacctgaagacattgtaaattttgcaaagctacaaagtaaaatt
ggccgagttgatagccttgatgatgatggctttccatatgttggtgctaatttgcagagc
ggtgatattattattgggaagggtgctgaatctggtgcagacaatagtgtaaagttaaag
cacactgaaaggggttatgtgcaaaaggttgtgctgtcttcaaatgacgaagggaaaaat
tttgctgtggtttcattaagacaggttcgaagtcccgttcttggagacaagttctccagt
atgcatggacaaaagggagttttgggatttctggagtctcaggaaaattttcctttcaca
agacaaggcattgttcctgatattgtcataaatccacatgcatttccctcacgacaaact
cctgggcaactcctagaggctgctttaggaaaggggattgcttgtggtggcatactgaga
caagctacgcctttctccacaccttctgttgatgccattactgaacagcttcacagagct
gggttttcaagatggggaaatgagagggtatacaatggaaggactggtgagatggttcga
tcactcatttttatgggaccaacattttaccaacgtctgcaccatatgtctgaagacaaa
gtgaaattccggaacactggtccagttcacccgttgacccgacagcctgtagctgacaga
aaacgatttggaggtatcaagttcggtgagatggagcgtgattgcctaatagctcatggt
gcatcagccaacctgtatgaacgcctgtttacactcagtgactcctctcagattcatatc
tgcagcaaatgcaaaaatgttgcaaatgtgatcttgcggcctgtctctggtggccggaaa
atacgaggaccttattgccgccactgtgaatctgcggatgacattgtggtggctcatgtc
ccgtatggagcaaagttattatgccaggagctctttagcatgggcataaatcttaaattt
gaaacccaactttgctag

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