Glycine max (soybean): 100793088
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Entry
100793088 CDS
T01710
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Module
gmx_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100793088
Enzymes [BR:
gmx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
100793088
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
100793088
NCBI-ProteinID:
XP_014633058
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Position
7:40353422..40356883
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AA seq
396 aa
AA seq
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MEQTKITCTVRCPQILSYKYPHKPFQLPSHTTFFTTCTTPSSNFSHHYLDHNQSSSTLKK
IIKMANPTPKPSPSLIILRVILGCWLCSSVALGATYNVVNFGAKSDGKTDSTKAFLNAWA
KACASTNPASIYVPQGKFLLKSATFNGKCNNKGISITIDGTLVAPSDYRVTENSGNWLEF
ERVNGVSIHGGALDGQGTALWDCKNSGKGNCPSGATTLAFTNSNNIAIGGLTSMNSQLFH
IVFNGCQNVKLQGVKVLADGNSPNTDGIHIQMSSHVAIINSKIRTGDDCISIGPGTTNLW
IENIACGPGHGISIGSLGKDLKEAGVQNVTVKTVTFTGTQNGVRIKTWGRPSNGFVRNVL
FQDAIMENVENPVIIDQNYCSDNKGCPGQASGVRVM
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaactaaaataacctgcacagtgcgttgccctcaaatccttagttataaatac
cctcacaaaccgttccaactcccatcccacaccaccttcttcaccacttgcacaactcca
tcttccaacttctctcatcactacctcgatcataatcaatcatcttcaacactaaaaaaa
ataataaaaatggcaaacccaacaccaaaacctagtcctagtcttattatccttcgtgtg
atcttaggttgttggttgtgttcatccgtggcattgggagccacatacaatgtggtcaat
tttggtgccaaatcggatggcaaaacggactcaaccaaggcatttctcaatgcatgggcc
aaagcttgtgcttcgaccaacccagcctcaatttacgtgccacaaggaaagttcttgctt
aaaagtgcaaccttcaatgggaaatgtaacaacaagggtatttctataacaattgatggc
actttggtggctccttcagattatagggtcaccgaaaactccggtaactggttggaattc
gagcgtgtcaacggagtttcgattcacggcggggcgcttgacggccaaggcactgccttg
tgggattgcaagaactccggcaaaggaaactgccccagcggagccacgacattggcgttc
accaactccaataacattgccattggtgggttgacctcaatgaacagtcaactgtttcac
atagtgtttaatggatgccagaacgtgaagctgcaaggagtgaaggtcttggccgatgga
aacagccccaacaccgacggcatccatatccaaatgtcatcacacgtcgccatcatcaac
tccaaaattcgaacaggcgatgattgcatctccattggtcctggaaccactaacttgtgg
atcgaaaacattgcttgtggaccaggacatggaataagcattggaagcttgggaaaggat
ttgaaggaagctggtgttcaaaatgtgacagttaaaacggttacattcactggaactcaa
aatggtgttagaataaagacgtgggggagacccagcaacggatttgtgaggaacgtcctt
ttccaagacgcaatcatggagaatgttgaaaaccccgttataattgaccaaaactattgc
tcagataacaagggttgccccggtcaggcttctggagtcagagtgatgtga
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