Gluconobacter oxydans H24: B932_2027
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Entry
B932_2027 CDS
T02348
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
goh
Gluconobacter oxydans H24
Pathway
goh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
goh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B932_2027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
goh03021
]
B932_2027
03400 DNA repair and recombination proteins [BR:
goh03400
]
B932_2027
Enzymes [BR:
goh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B932_2027
Transcription machinery [BR:
goh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B932_2027
DNA repair and recombination proteins [BR:
goh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B932_2027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AFW01594
LinkDB
All DBs
Position
2040175..2041194
Genome browser
AA seq
339 aa
AA seq
DB search
MVLQKNWQSLIKPEKLEVEPGPVASRIATVVAEPLERGFGMTLGNALRRILLSSLQGAAV
TAIQIDGVLHEFSAVPGVREDVTDIVLNVKQLALRMHGEGPKRMILTATGPGEVTAGQIQ
AGHDIEIMNPDLVICTLDDGVKLGMEFTVNMGKGYVAAAANRPEDAPIGMIPIDAIYSPV
RRVSYKVEQTRVGQVTDYDKLLLTVETNGAVTPEDSLALAARILQDQLQLFINFDEPRPV
QHEEPQDDLPFNRNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKSEQEMLRTPNFGRK
SLNEIKEVLTGMGLSLGMSVPAWPPENIEDLAKRLDETF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttggttctccagaaaaactggcagtccctcatcaagccggagaagcttgaagtcgagccc
ggcccggttgcctcgcgcatcgccaccgtcgtggcggagccgctggagcgcggcttcggt
atgacgctcggcaacgcgctgcgtcgtattcttctgtcttcccttcagggcgcagcagta
actgccatccagattgatggcgttctgcatgagttctctgctgttccgggtgtgcgcgaa
gacgtgacggacattgtccttaacgttaagcagctcgcactgcgcatgcatggtgaaggc
ccgaagcgcatgattctcacggcgactggtccgggagaagtgacggcagggcagattcag
gccggtcatgacattgagatcatgaatcctgacctcgtgatctgcactcttgatgatggt
gtgaaactcggaatggagttcaccgtcaacatgggtaagggctacgttgcggctgctgca
aaccgtccggaagacgcaccgatcggcatgatcccgattgatgccatctactcgccggtt
cgtcgcgtgtcttacaaggtcgagcagacccgcgttggtcaggttactgactacgacaag
ctgctgctgacggttgagacgaatggtgctgtaacgccggaagacagtctggctcttgct
gcgcgtattctgcaggatcagcttcagctgttcatcaactttgatgaaccgcgtccggtc
cagcacgaagagccgcaggatgacctgccgttcaaccgcaatcttcttcgcaaggttgat
gagcttgagctttcggtgcgtagcgccaactgcctcaagaacgacaacattgtttatatc
ggcgatctggtgcagaagtccgaacaggaaatgctccgtacgccgaatttcgggcgtaag
tcgctcaacgagatcaaggaagttctcaccggtatggggctgtcgctcggcatgagcgtt
ccggcctggccgcccgagaacatcgaggatctggccaagcgtctcgatgagacgttttga
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