Gluconobacter oxydans H24: B932_2442
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Entry
B932_2442 CDS
T02348
Name
(GenBank) metal-dependent hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
goh
Gluconobacter oxydans H24
Pathway
goh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
goh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B932_2442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goh03019
]
B932_2442
Messenger RNA biogenesis [BR:
goh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B932_2442
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
RMMBL
RNase_J_C
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
AFW01996
LinkDB
All DBs
Position
2435448..2437106
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AA seq
552 aa
AA seq
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MTDTPDGLSFLPLGGTGEIGMNFNLYRLTKNNKETWLAIDCGIGFSGNDTPEAEVLMPDP
TFIADRAKDLCGLVITHAHEDHLGAVAHLWPYLRCPVYATPFAAAVLRRKLHEAHLVHQV
KIHVVMPGSRFHVGPFDLQLVSVTHSVAEAQAVALRTPHGLIVHTGDWKLDENPLVGPKT
DLEEFGRLGDEGVLAMVGDSTNVMKEGRSESEADVRKGLTDLITSLQGRVAVTCFASNVA
RVESIAKAAMAAGRAVMIVGRSLRNLETAARECGYFSDLPPFLTEQDARDVHDDNLLMII
TGSQGEPRSALSRIASDTHPNISLGEGDTVIYSSRVIPGNEQAVMAVQDNLSRRGVTVLT
DKDAKVHTSGHATGDDIRVLYGIVRPKYSIPTHGEWRHLTAHAALAHEMGSEPILLEDGD
ILNLSPGEVKVVDTAPTGRLALDGGRLLPMTGGVLAARRKMLFNGMVIASFAVDDEGYVI
GEPKISAPGLLEAEDPESIRIQEEFADSIDEIPDELRQDDTAFRDAAKTALRRALGRKLQ
KRPLVDVHLLRV
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgacggatacacctgacggtttgtccttcctgcctctgggcgggacgggcgagatcggc
atgaatttcaatctttatcgcctcacaaaaaataataaggaaacctggctcgccatcgat
tgtggcatcggtttctcgggcaacgatacgcctgaagccgaagtgcttatgccagatccg
acgtttattgcggatcgagcaaaagacctctgcggcctcgtcattacccatgcccatgaa
gatcacctcggtgcggtagcccacctgtggccgtatctgcgctgcccggtctatgccacg
ccgttcgctgcggccgtcctgcgccgtaagctgcatgaggctcacctggtccatcaggtg
aagatccatgttgtgatgccgggatcgcgcttccatgtggggccgtttgatcttcagttg
gtctcggtaacccactctgtcgccgaggcgcaggctgtcgctcttcggacgccgcatggt
ctcatcgttcatacgggtgactggaagctcgacgagaacccgctggtcggcccgaagacg
gatcttgaagagttcggtcgcctcggggacgagggcgttctggcgatggtgggtgacagt
accaacgtcatgaaggaaggtcgctcagagtccgaagctgatgtccgtaaaggcctgacg
gatctgatcacaagccttcaggggcgtgtggctgtaacgtgctttgccagtaacgtggcg
cgcgttgagagcattgcgaaggctgccatggcggctggtcgtgcggtcatgatcgtcggt
cgttctctgcgcaatcttgaaacggctgctcgtgagtgcggttacttcagcgatctgcca
ccgtttctgacggagcaggatgcgcgcgacgtccatgatgacaatcttctgatgatcatc
acaggaagtcagggtgagcctcgttcggccctgtcccgtatcgcatctgatacccatccg
aacatttccctcggtgagggcgacacggttatttacagctcgcgtgtcatcccggggaat
gagcaggctgtcatggctgtgcaggacaacctgtcccgtcgtggtgtgactgttctgacg
gacaaggatgccaaggttcatacgtccggccatgcaacgggcgatgatattcgtgtcctg
tatggtatcgttcggccgaaatatagcattccaacccatggtgaatggcgccatctgacg
gctcacgcggctctggcccatgaaatgggttctgaaccgattctgctggaagatggcgat
atcctgaacctgtctccgggcgaagtgaaggttgttgatacggcaccgactggtcgcttg
gctctggatggtggtcgtcttctgcccatgacgggtggcgttctggcggcacgccgcaag
atgctcttcaatggcatggtcattgccagcttcgctgtggatgacgaaggctatgtgatc
ggcgagccgaagatcagcgcgcctggtctgcttgaagcggaagatccggaaagcattcgc
attcaggaagaattcgctgattccattgacgaaatcccggatgagctgcgacaggacgac
acggcattccgtgacgcagccaagacggccctgcgccgggcactggggcgcaagcttcag
aagcgtccgcttgtcgatgttcatctgctgcgcgtctaa
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