Gordonia insulae: D7316_02206
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Entry
D7316_02206 CDS
T05722
Symbol
radD
Name
(GenBank) Putative DNA repair helicase RadD
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
gom
Gordonia insulae
Pathway
gom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
D7316_02206 (radD)
09124 Replication and repair
03420 Nucleotide excision repair
D7316_02206 (radD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gom03021
]
D7316_02206 (radD)
03400 DNA repair and recombination proteins [BR:
gom03400
]
D7316_02206 (radD)
Enzymes [BR:
gom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D7316_02206 (radD)
Transcription machinery [BR:
gom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
D7316_02206 (radD)
DNA repair and recombination proteins [BR:
gom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
D7316_02206 (radD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-ProteinID:
AZG45610
UniProt:
A0A3G8JN58
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All DBs
Position
2395162..2396838
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AA seq
558 aa
AA seq
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MERVTDGPLIVQSDKTLLLEVDHPDAPAARAAIAPFAELERAPEHVHTYRVTPLALWNAR
AAGHDAEQVVDALVTYSRYAVPQPLLMDVVDTMGRFGRLQLVKHPAHGLTLVSFDRAVLE
EILRNKKVAPMLGARLDDDTVVVHASERGRLKQVLLKVGWPAEDLAGYVDGEAHPIDLDQ
GDWHLRDYQALAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKARATTLILVTNTVAGRQW
KRELVARTSLTEDEIGEYSGERKEIRPVTIATYQVMTRKSKGEYRNLDLFDSRDWGLIIY
DEVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGW
IAPAECIEVRVTLTDEERLQYAVAEADAKYKLCSTAHTKVNVVKSILARHQDSPTLVIGA
YIDQLEELGAALDAPVIQGSTKNKEREALFDRFRSGELQTLVVSKVANFSIDLPEASVAV
QVSGTFGSRQEEAQRLGRLLRPKRDGGQAHFYSVVSRDTLDADYAAHRQRFLAEQGYAYR
ITDADDLLGPTIGEESPS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggtgaccgacggacccctgatcgtgcaatccgacaagacgctgctgctcgag
gtcgaccaccccgacgcgcccgccgcacgtgcggcgatcgcaccgttcgccgaactcgaa
cgcgctcccgagcatgtgcacacctatcgtgtgacgccgctcgcgttgtggaacgcgcgt
gctgcggggcatgacgccgaacaggtcgtcgatgcgctcgtcacctactcccgctatgcc
gtgccgcagcccttgctcatggacgtcgtcgacaccatgggccggttcgggcggttgcag
ctggtcaagcacccggcacacggcctgaccctggtcagtttcgaccgcgcggtgctcgag
gagatcctgcggaacaagaaggtcgcgccgatgctcggcgcccgcctcgacgacgacacc
gtggtggtgcacgcgtccgaacgcggtcgactcaagcaggtcctgctcaaggtcggctgg
ccggccgaggacctggccggctacgtcgacggcgaagcccacccgatcgatctggaccag
ggcgattggcacctacgtgactaccaggcgctggccgccgactcgttctgggccggcggc
tcgggtgtggtggtgttgccgtgtggtgccggcaagaccatggtcggcgcggccgcgatg
gccaaggcgcgcgcgaccaccctgatcctggtcaccaacacggtcgccggacgccagtgg
aagcgcgagctggtggcccgcacgtcgttgaccgaggacgagatcggcgagtactccggc
gaacgcaaggagatccgtccggtcaccatcgcgacctatcaggtgatgacccgcaaatcc
aagggcgagtaccgcaatctcgacctcttcgactcccgcgactggggactgatcatctac
gacgaggtgcacctgttgcccgcgccggtgttccggatgaccgccgacctgcagtcccgt
cgtcggctcggtctgaccgccaccctggtccgcgaagacggccgcgagggcgatgtgttc
agccttatcggacccaaacgctacgacgcgccgtggaaggacatcgaggcacagggctgg
atcgcgcccgccgagtgcatcgaggtccgggtgaccctcaccgacgaggaacggttgcaa
tacgccgtcgccgaggccgacgcgaagtacaagttgtgctcgacggcccacaccaaggtc
aacgtggtgaagtcgatcctggcgcgccaccaggactctcccaccctggtgatcggcgcc
tacatcgaccagctcgaggagctcggcgccgcgctcgacgccccggtgatccaagggtcc
acgaagaacaaggaacgcgaggccctgttcgatcgtttccggtccggcgaactgcagacc
ctggtggtctccaaggtggccaacttctccatcgacctgcccgaggcgtcggtcgcggtg
caggtctcgggcaccttcggttcgcggcaggaggaggcccagcgactgggtcggctactg
cgtccgaaacgtgatggcggacaagcgcatttctactcggtggtctctcgcgacaccttg
gatgcggactatgccgcgcatcgccagcgattcctcgccgaacagggttacgcctatcgg
atcaccgacgccgacgacctgctggggccgacgatcggcgaggagtcaccgagctga
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