KEGG   Gemella sp. oral taxon 928: AXE85_04090
Entry
AXE85_04090       CDS       T04256                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
got  Gemella sp. oral taxon 928
Pathway
got03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:got00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AXE85_04090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:got03400]
    AXE85_04090
Enzymes [BR:got01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AXE85_04090
DNA repair and recombination proteins [BR:got03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AXE85_04090
SSDB
Motif
Pfam: PriA_3primeBD ResIII DEAD Helicase_C PriA_CRR PriA_C zf-C3HC4_3 Calpain_III
Other DBs
NCBI-ProteinID: AME09384
UniProt: A0A109WH25
LinkDB
Position
902182..904533
AA seq 783 aa
MFAEVIVDVNAYNVDRTFYYLIPEELRGEDIIGYRVEVPFGTRIVQGYVINIFERYNGEI
SEFKYIKRLKDNFPILTKEMLLLSKVMANELFCTRIQVIETIVPTILKNKYIEYYELLDA
NKTLLIDYGKHFKDNLIEKKKFEKLFSKQEIGYLLSVKAIKLISKIKENNNKEVELFLEL
ADYHGKKLTQKQKILVAYLKQNKRIKKNKVKEILDIGVSVVKKLLDNNIIKIVEIEKEEK
MDDNYINSNKLSIYQKEIFNKIKCNLDKNKFNEYLLHGITGSGKTEIYLKLVEEVLKLGR
EAIILVPEIILTPQIEKKFKKIFGNNVVVIHSRLTAREKFLEWKKIKEGKVKICLGTRSA
IFAPFEKLGLIIIDEEHENSYKQSDNPRYEAKDIAKKRAIYNKCSVVYASATPSIDLYYR
FEKNNPNNLLTLTQRFNNVLPKVEVLHVHDKEEVISKKLLNKIKEKISKNEQILLLMNKR
GYTNYIRCFSCGHMYTCENCDISLNYHKHDNSLRCHFCGFHKKIANIKKCCDNPELVSGN
YGIQRVEEYLRENIKDVRITRMDSDTTGKKGAYEKLLTDFREHKSDILLGTQMISKGLDF
PNITLVGVLSIDSLIAIPSFKANEKLFQLLVQTAGRAGRSEKAGEVIFQTNVSSSIIDFA
IRHNYKDFYNYELKRRKLINYPPFCNISFITIKGYAEEKVSFVAKSIYNFLKEKYGDKNI
LGPNKSIFYKINNEYKFNIAIRFQEVDYKKLYPLLKYINNYFEESYATQKITITIDNSAL
DYM
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgtttgcagaagtaatagtagatgtcaatgcttataatgtagatagaaccttttattat
ttaattccggaagaattacgtggagaagacattataggctacagagtagaagttcctttt
ggtacgagaatagttcaaggatatgtcataaatatttttgaacgctacaatggggaaatt
tcagagtttaaatatataaaacgtttgaaagataattttcctattttaactaaagaaatg
ttgcttctttcaaaggtgatggctaatgaacttttttgtaccagaatacaagttattgaa
actatagtgccaactattttaaaaaataaatacatagaatattatgagttgttagatgct
aataaaactcttttaatagattatggaaaacattttaaagataatttaatagaaaagaaa
aaatttgaaaaattattttccaagcaggagataggatatttattatcggtaaaagctata
aaattaattagtaaaataaaagaaaataataataaagaagttgaattatttttggagtta
gcagattatcatggtaagaagctcactcaaaagcagaaaattttagtggcatacttaaaa
caaaataaaaggattaaaaaaaataaagtaaaggaaatcttggatatcggagtttcagta
gttaagaagcttttagataataatattataaagatagttgaaattgaaaaagaagaaaaa
atggatgacaactatataaattcaaataaattaagtatctatcaaaaagaaatttttaat
aaaattaagtgtaatttagataaaaataaatttaatgaatacttacttcacggtatcacc
ggttcaggaaaaacagaaatttatttgaaattggttgaggaagttttaaagcttggaagg
gaggctataattcttgttcctgagattattttaactccacaaattgagaaaaaatttaaa
aagattttcggaaataatgttgtggtaattcactcaagactgacggcacgagaaaaattt
ttggaatggaagaaaattaaagaaggtaaggtgaaaatttgtcttggaacccgttcagcg
atttttgcaccgtttgaaaaattagggcttatcattattgatgaggaacatgagaatagt
tataaacagtcagacaatccacgttatgaagcaaaggatattgcaaagaaacgtgcgatt
tataataagtgtagtgtagtgtatgccagtgctacaccatctattgatctatattatcgt
tttgaaaaaaacaaccctaacaatttattaacattaacacaaaggtttaataatgtattg
cctaaagtagaagtgcttcatgttcatgataaagaagaggtaatttctaaaaaactattg
aacaaaataaaagaaaaaatttcaaagaatgaacaaattttacttcttatgaataagcgt
ggatatacaaactatattcgttgtttttcttgcggtcatatgtacacttgtgaaaattgt
gatataagtttaaactatcacaagcatgataattcattgagatgtcatttttgcggtttt
cataaaaaaatagcaaatataaaaaaatgttgcgacaatccagaacttgtatccgggaat
tatggtattcaacgtgttgaggaatatttaagagaaaatataaaagatgttagaattaca
agaatggattcagatactacaggaaaaaaaggtgcttacgaaaaactccttacggatttt
agagagcataaatcggacatacttttaggtacacaaatgatttcaaaaggattggatttt
ccaaatataaccttagtaggagttttatcaatagattctcttatcgctattcccagtttt
aaagcaaatgaaaaactattccaacttcttgtgcaaacggcaggaagagcggggagaagt
gaaaaagcgggagaagtaatctttcagactaatgtttctagtagtattattgactttgcc
ataagacataattataaagatttttataattacgaattaaaaaggagaaaattaataaat
tatccaccgttttgtaatatttcgtttattaccataaaaggatatgctgaagaaaaggtg
agttttgttgcaaaatcaatttataattttttaaaagaaaaatacggtgataaaaatatt
cttggaccaaataaaagtatattttataaaataaataacgagtataaatttaatatagct
attagatttcaagaagttgattataaaaaactttatccacttttgaagtatattaataat
tattttgaagaaagttatgctacacaaaaaataacaataacaatagataattcagcgtta
gattatatgtaa

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