Gordonibacter pamelaeae: GPA_04010
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Entry
GPA_04010 CDS
T02609
Name
(GenBank) Ku protein, prokaryotic
KO
K10979
DNA end-binding protein Ku
Organism
gpa
Gordonibacter pamelaeae
Brite
KEGG Orthology (KO) [BR:
gpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GPA_04010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpa03400
]
GPA_04010
DNA repair and recombination proteins [BR:
gpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GPA_04010
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
CBL03432
UniProt:
D6E6T5
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All DBs
Position
401027..401875
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AA seq
282 aa
AA seq
DB search
MAGRKGAIAFGLVYIPVELYPATQDDAVRFNQLAKESMQRVRYVKTCPDCNRELGPDDIV
RGYQYEKGKYVVVSDEELDAIKTDADRAMKIVQFVDLQEVPPVYFEKPYQVRAQPGGEKP
LELLRLAMVEEGKAAIGTTVLGNSETPLALIPYGDDLVMMTLHYQSEVRDLPKPAERPAV
DDAELDMARRLVESMAEPFDPARFKNAYQEKLMGLIQDKIAGKQVTPEKHGPQPANVINL
MDALAASLKARTGEDAGGAKAGSAESAKAPKPKRKPPAKRAG
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaggaaaggcgcgatcgccttcggcctcgtctacataccggtggagctctat
cccgccacccaggacgatgccgtgcgcttcaaccagctggcgaaggagagcatgcagcgc
gtgcgctacgtgaagacgtgccccgattgcaaccgcgagctgggcccggacgacatcgtg
cgcggctaccagtacgagaagggcaagtacgtggtggtgagcgacgaggagctggacgcc
atcaagaccgatgccgaccgtgccatgaagatcgtgcagttcgtggatctgcaggaggtg
ccgcccgtctacttcgagaagccctaccaggtaagggcccagcccggcggcgagaagccg
ctcgagcttttgcgcctggccatggtcgaggagggcaaggccgccatcggcaccacggtg
ctgggcaactccgagacgccgctggcgctcatcccctacggcgacgacctggtcatgatg
acgctgcactaccaaagcgaggtgcgcgacctcccgaagccggccgagcgccccgccgtg
gacgacgcggagctggacatggcgcgccgcctggtggagagcatggccgagccgttcgac
cccgcccgcttcaagaacgcctaccaggagaagctcatgggcctcatccaggacaagata
gccggcaagcaggtgacccccgagaagcacggcccccagcccgcgaacgtcatcaacctc
atggacgccctcgccgccagcctgaaggcccgcaccggggaggatgccggaggagcgaaa
gcgggcagcgccgagagcgcgaaggcgcccaagccgaagcgcaagccccccgcgaagcgc
gccggctga
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