Gordonibacter pamelaeae: GPA_09090
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Entry
GPA_09090 CDS
T02609
Name
(GenBank) diguanylate cyclase (GGDEF) domain
Organism
gpa
Gordonibacter pamelaeae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
dCache_1
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
CBL03680
UniProt:
D6E7I3
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All DBs
Position
complement(879969..882227)
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AA seq
752 aa
AA seq
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MKSRKTLISILVTLVSVAVIAGTVLFARFVQDSLWEKSVTDVLEVTEQGQHALDTYFGKD
LDTLDLFASELSLQHPDDEARMAEKLALFGAGNDGTVYVCANLVTGAVYRTDNDSAANLT
AEQLVLAETAGERGVMEPFLDERTGSNMIGVYERFAFSDGTPGIVRKARPLNDMEARFSL
SFYNGSGFSYVVNTEGDVVMRSQHRNSNRTFSNIYDIVGYEGNDEADVESFRAALEQNAR
GVALFSYHGDDYVFCYTPLAGTDGWDVVSIIPNDVVMEQANAIINATLLLCLVIIAGLGI
VLAVYWRGSRAHRREIERMAFYDDLTGLYSAAKFALEGDERLAELGRGGSDGAAAVCVDI
DNFKLINDVDGYERGDEVLRELAAILCDEAGRDGIAARLSADNFLLLLPYARCEEALDAC
RRVAERARGIVGNGKPLSLHIGLCCSEDAPDARDVNELMDRARIAQNESRKRGITPCAYS
KPMRDALLRRADLERSMEGALAQGEFFHLVQPKYDVAGTCVLGGEALVRWRRPDEGIVGP
DEFIPLFEQNGFILRLDEFVFESVCRDLRARLDAGLPVVPISVNVSRLHLHRPDFLPTYV
RIKDEYGIPDGLCELELTESIVIEDLHGVFGIMEGMRRAGFRCAIDDFGSGQSSLNVLKD
LPADVLKLDREFLLESSLPGTEETVVRFVITMARELRMETVMEGVETPKQLAFLRTTECD
MVQGFVFSRPVPPEEFYRLLETGAPDEGAFRD
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgcggaagacgctcatctcgatcctcgtgacgctggtctccgtggccgtgatc
gccggcacggtgctgttcgcgcgtttcgtgcaggattcgctgtgggagaagtccgtgacc
gacgtgctggaggtgacggagcagggccagcatgccctggacacgtacttcgggaaagat
ctcgacacgctcgacctgttcgcatcggagctgtcgctgcagcatcccgacgacgaggcg
cgtatggcggagaagctggcgctgttcggcgcgggcaacgacggcacggtgtacgtgtgc
gcgaatctcgtcacgggcgccgtgtaccgtacagacaacgacagcgcggcgaacctcact
gccgagcagctcgtccttgcggagacggctggcgagagaggggtcatggagccgtttctg
gacgagcgcacgggcagcaacatgatcggcgtctacgagcgcttcgcgttctccgacggc
acgccgggcatcgtgcgcaaagcccggccgctcaacgacatggaggcgcggttctctctg
tcgttctacaacggcagcggcttctcatacgttgtgaacaccgaaggcgacgtggtcatg
cgctcgcagcaccgcaacagcaaccgcacgttctcgaacatctacgacatcgtgggctac
gagggcaacgacgaggcggacgtcgagtcgttccgggccgcgctcgagcagaacgcgcgt
ggcgtggcgctgttctcgtaccatggagacgactacgtgttctgttacacgccgctcgcc
ggcacggacggctgggatgtggtgtccatcattcccaacgacgtggttatggagcaggcg
aacgccatcatcaacgccacgttgctgctgtgcctcgtcatcatcgcgggtttgggcatc
gtgctggcggtgtactggcggggcagccgcgcacatcggcgcgagatcgagcgtatggcg
ttctacgacgacctgaccgggctgtacagtgccgccaagtttgcgctcgagggcgatgag
cggcttgcggagctcggccgcggcggctcggacggggcggcggcggtgtgcgtcgacatc
gacaacttcaagctcatcaacgacgtcgacggctatgagcgcggcgacgaggtgctgcgg
gaactcgccgccatcctgtgcgacgaggcgggcagggacggcattgcggcgcgcctttcg
gccgacaatttcctattgctgcttccgtacgcgcgctgcgaggaagcgctggacgcgtgc
aggcgcgtggccgagcgcgcgcggggcatcgtgggcaacggcaagccgctctcgctgcac
atcggcctgtgctgttcggaggacgcgcccgatgcgcgcgacgtcaacgagctcatggac
cgcgcgcgcatcgcccagaacgagtcgcgcaagcgcggcatcacgccatgcgcctacagc
aagcccatgcgcgacgccctgctgcgccgagccgatttggagcggtcgatggaaggggcg
ctcgcgcagggcgagttcttccacctcgtgcagccgaagtacgacgtggcgggcacgtgc
gtgctgggcggcgaggcgctcgtgcgctggaggcgtcccgacgagggcatcgtgggaccc
gacgagttcatcccgctgttcgagcagaacgggttcatcctgcggctcgacgagttcgtg
ttcgagagcgtgtgccgcgacctgcgcgcccgcctggacgccgggctgcccgtggtgccc
atctcggtgaacgtgtcgcggctgcatctgcatcggcccgatttcctgcccacctacgtg
cgcatcaaggacgagtacggcattcccgacgggctgtgcgagctggagctcacggagagc
atcgtcatagaggacctgcacggcgtgttcggcatcatggagggcatgcgccgcgctggc
ttccgctgcgccatcgacgatttcggctcggggcaatcgtcgctcaacgtgctgaaggac
ctgcccgccgacgtgctgaagctcgaccgcgagttcctgctggagagctcgcttcccggc
acggaggagacggtggtgcgcttcgtcatcaccatggctcgggagctgcgcatggaaacc
gtcatggagggcgtggagacgcccaagcagctggcgttcctccgcacgaccgagtgcgac
atggtgcagggcttcgtgttctcacgccccgtgccgcccgaggagttctaccggctgctg
gaaacgggggcgccggacgagggcgcgttccgagactga
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