Gamma proteobacterium HdN1: HDN1F_02020
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Entry
HDN1F_02020 CDS
T01300
Name
(GenBank) Putative glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00250
Alanine, aspartate and glutamate metabolism
gpb00410
beta-Alanine metabolism
gpb00430
Taurine and hypotaurine metabolism
gpb00650
Butanoate metabolism
gpb01100
Metabolic pathways
gpb01110
Biosynthesis of secondary metabolites
gpb01120
Microbial metabolism in diverse environments
gpb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
HDN1F_02020
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HDN1F_02020
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HDN1F_02020
00430 Taurine and hypotaurine metabolism
HDN1F_02020
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HDN1F_02020
Enzymes [BR:
gpb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
HDN1F_02020
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Gene cluster
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Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
CBL43785
UniProt:
E1VG43
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All DBs
Position
260893..262569
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AA seq
558 aa
AA seq
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MHQDKRPATQRFAEANMDAMYRIFTVPEAPGSTLGQIDNMISQNLMGFLQNHIVAVEKDL
SEVEKDFADAHIPEKPWFVSDQTQFLLDKLVAQSVHTASPSFVGHMTSALPYFMLPLSRI
MMALNQNLVKIETSKAFTPLERQVLGMMHRLIYERDDKFYDQWMHKSGHSLGVLCSGGTI
ANMTALWVARNAMFKPSKGFKGINHTGVFGALKHHGLEGMAVLVSERGHYSLAKAADVLG
IGRDHLLTVRTDDNNKVNIRKMRQKLEECRSRNIGVMAIVGVCGTSETGTVDPLNDLADL
AEEFGCHYHVDAAWGGATLFSQKYSHILEGIRRADSVTIDGHKQLYVPMGAGMVFFKNPT
ALSNIQHHAEYIIRQGSKDLGSHTLEGSRPGMAMLVHSGLRIIGRSGYEILINEGIEKAR
AFADMVRAEPDFEMITEPELNILTYRYVPEFVKKKLATANAREIDHIHDLLNRLTKLIQK
TQRARGKSFVSRTRLTPEKYGHRLTVVFRVVLANPLTNHQILRGVLEEQRTIASLEDCQQ
LLRQLSEACAEARHVSNG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaggataaacgcccggctacgcaacgctttgcggaagccaatatggatgccatg
tacaggatttttacggttcctgaagcgccgggttcgaccttgggccagattgacaatatg
atcagtcagaacctgatgggctttctgcagaaccacatcgtcgcggttgaaaaggacctc
tcggaagtcgaaaaagacttcgcagacgcccacattcccgaaaaaccttggtttgtgtcc
gatcaaacccagtttttgttggacaaactggttgcgcagtcggtgcacaccgcatcgccg
agttttgttggacatatgacgtccgcgctgccgtatttcatgctgccgctttcgcgcatc
atgatggcgctgaaccaaaacctcgtaaaaatcgaaacctccaaggcgttcacaccgctg
gaacgtcaggtgctcggcatgatgcaccgcctgatttatgagcgtgacgacaagttttac
gatcaatggatgcacaaaagcggccactcactcggcgtgttatgttcgggtggaaccatc
gccaacatgacggcactttgggtggctcgaaatgccatgttcaaaccgtcgaaaggcttc
aaaggcatcaatcataccggcgtgtttggtgcgctaaagcaccacggcctagagggaatg
gcggttctggtatcggagcgcggccattattcacttgccaaagctgccgacgtattagga
attggccgcgatcatttattaacggttcgtaccgacgataacaacaaggtcaatatccgc
aagatgcgccaaaagctcgaagaatgccgctcgcgcaatatcggcgtgatggccattgtg
ggcgtctgcggcacgtctgaaaccggcaccgtagatccgttgaatgatctggccgatctc
gctgaagaatttggctgccactaccacgtagacgcggcatggggcggcgctacgctcttc
tcccaaaaatattcccacatccttgaaggaatccgccgcgcagactcggtcaccatcgac
ggtcacaaacagctatacgtaccgatgggcgcagggatggtgttcttcaagaatccaacg
gcgctctccaacatccagcaccacgccgaatacattatccgccaaggctccaaggatttg
ggctcgcacaccctagaaggttcacgccccggtatggcgatgcttgtacattccggctta
cgaatcatcgggcgcagcggctacgaaatcctcatcaatgagggcatcgaaaaggcgcgc
gcatttgccgatatggttcgcgccgaacctgatttcgaaatgattaccgagccagaactc
aatattctgacctatcgctacgttcccgaatttgtgaagaaaaagctcgcaaccgccaac
gcacgcgaaattgatcatattcacgatctgctcaaccggctcaccaaattgatccagaaa
acccagcgcgcgcgcggaaaatcctttgtttcgcgcacccgcctaacgcctgaaaagtac
ggccaccgcttaacggtagtgttccgtgtagtgctggcgaatccgctcaccaatcaccag
attttgcgcggcgttctagaagagcaacgcacgattgcctctcttgaagactgccagcag
ctattgcgccaattgagcgaggcttgcgccgaagctcgccacgtgagcaacggttag
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