Gamma proteobacterium HdN1: HDN1F_09010
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Entry
HDN1F_09010 CDS
T01300
Name
(GenBank) hypothetical protein
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
gpb
Gamma proteobacterium HdN1
Brite
Enzymes [BR:
gpb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
HDN1F_09010
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
HAMP
GGDEF_2
CHASE8
LapD_MoxY_N
Motif
Other DBs
NCBI-ProteinID:
CBL44484
UniProt:
E1VI42
LinkDB
All DBs
Position
complement(1111037..1113139)
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AA seq
700 aa
AA seq
DB search
MNKKNNFRFKLSTKLFLAIMGASLCMGFILTLAQISIDYNNTRTRLTALGTEAVQTMQLP
IAEVAKAHDIAMARSILEDLFRKTYLIEISITTQRGETLAHLSRPRSTTRFTWLSDLAFG
KFRSFEIPLQHTEQGKTIPLGALSLVLDTSDSGGDFIARTFTTLFAGMLQATGFGLILYA
IIHGLITRPLSQLILSIDEIDARRLGTRSLQIPQGHQNDEIGVWVRKFNQMLEAIGDYSR
YRRLAEANVERLSNYDTLTELPNRSLFLKRLDALNQPLTSDHYSALFYIGLDDFSSVNLL
HSYRTGDRVLTTLADRLRKSTPDQALLMRAGGDQFCIAIRGTSEPQARELAHALLALVQQ
PFSGESTPLTLSATVGVAFFPRDAKAPELLLKKAEEAMRLGKSAGGNSIQFYSEIENHRQ
KASKQLERDLLTAVESSQLSLMFQPQIDLASGQIVGVEALLRWDHPQRGLISPDEFILLA
ESNRAVIPIGHWVLKNACKTLAEWHKAGYPDLGMSINLSAIQLHHPPLASDLAHIITEYG
LPPASLTFEITESSVMENIEHAIDVLKNIRKLGVHLAIDDFGTGYSSLSYLRRMPIDEVK
LDRSFFLDLDRDTHADSVKIIEAVIRLGHSLGLEIVAEGTESAAHVELLQRCGCDRSQGF
YYSEPLEADKFLALMHGERKLRAPTPNLSPNLSAPTLHHS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaagaacaacttccgcttcaaactttccaccaagctcttccttgcaatcatg
ggcgcatcactgtgcatgggttttatcctcaccctcgcgcaaatctccattgactacaac
aacacgcgcacccgcctcacagcgcttggcacagaagccgtacaaacaatgcaactccca
atcgccgaagtggcgaaggctcacgatattgcaatggctcggagcattttggaagatctg
tttcgcaaaacctacttaatcgaaatttccatcacaacccaacgcggcgagacccttgcc
cacctgtcgcgcccacgttcaaccacccgcttcacatggctctccgatcttgcctttggc
aaatttcgcagttttgaaattccgcttcagcatacagaacaaggaaaaacgattcccttg
ggtgcgctcagcctcgtacttgacacatcggatagcggtggcgatttcatcgctcgcacc
ttcaccactctttttgctggcatgctgcaggcaacaggctttgggctcattctctatgcc
attattcatggcttgatcacccgcccgctttcccagttgattctttcaattgatgagatc
gacgcacgccggctcggtacacgctcactgcaaattcctcaaggccaccaaaacgacgaa
atcggcgtttgggtacgcaaatttaaccagatgcttgaagcgatcggcgactatagccgc
taccgtcggctcgcagaggccaacgttgagcgcctcagcaactacgatactttaaccgag
ctccccaatcgcagcttgttcctaaagcggctggatgcactcaaccaacccttaaccagt
gatcactacagcgcccttttctatattggcctagacgacttcagctctgtaaaccttctg
cactcctatcgtacaggggatcgcgtactcaccacattggccgaccgcctgcgcaaatct
acccccgaccaagcgcttctgatgcgcgcgggtggcgatcaattctgcatcgccattcgt
ggaaccagtgaaccccaagcacgcgagcttgcgcacgctctgttagcactagtgcaacaa
cctttttcgggagaaagcacaccgctcacactctctgcaacggttggcgttgcctttttt
ccacgcgatgcaaaagcccccgaactccttttaaagaaagccgaagaagccatgcggctt
ggaaaatctgccggcggaaactccatccagttctacagcgaaattgaaaaccatcgccaa
aaagccagcaaacaactagagagagatctactcaccgccgtcgaaagcagtcagttaagc
ctcatgttccagccgcagattgatctcgcaagcgggcagattgtgggcgtcgaggctcta
ttacgttgggatcacccacagcgcggccttatttcacccgatgaattcatcctgctggca
gagagcaaccgcgccgtgatccccatcgggcactgggtattgaaaaacgcctgtaaaacc
ctcgcggaatggcataaagccggctatccagatctaggcatgtccattaacttaagcgcc
attcagctccatcaccccccacttgccagtgatcttgcgcacatcatcaccgagtacggc
ctaccgcccgcatcgctcacctttgaaattaccgaatccagcgtcatggagaacatcgaa
cacgcaatcgacgtactcaaaaacattcgcaaactgggcgtacatctggccattgacgac
tttggtacgggctattcatccctaagctacctgcggcgcatgcccatcgacgaagtcaaa
ctagatcgcagttttttcctcgacctcgaccgagacacgcacgctgacagcgtcaaaatc
atcgaagccgtgatacgcctcgggcacagcctcggcttagaaatcgtcgcggaaggcacc
gaaagtgcagcccatgtcgagctattgcagcgctgcggctgtgatcgcagccaaggcttc
tactactccgaacccctcgaagcagacaaattcctcgcacttatgcacggtgaacgcaaa
ctacgcgcaccgacgccaaacctatcgccgaatctctccgcaccgacgctacaccattcg
tga
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