Gordonia polyisoprenivorans: GPOL_c19770
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Entry
GPOL_c19770 CDS
T01719
Symbol
mutM2
Name
(GenBank) formamidopyrimidine-DNA glycosylase MutM
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gpo
Gordonia polyisoprenivorans
Pathway
gpo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GPOL_c19770 (mutM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpo03400
]
GPOL_c19770 (mutM2)
Enzymes [BR:
gpo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GPOL_c19770 (mutM2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GPOL_c19770 (mutM2)
DNA repair and recombination proteins [BR:
gpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GPOL_c19770 (mutM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TackOD1
NFACT_N
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AFA73016
UniProt:
H6MXY4
LinkDB
All DBs
Position
2246293..2247204
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AA seq
303 aa
AA seq
DB search
MPELPEVETVRLGLADHVVGQRITTVEVLHPRAVRRHAGESADLASRLAGKTVTAARRRG
KYLWLDVADDTDDAALVVHLGMSGQMLIARAGAPDHTHLRIRAQLADGNELRFVDQRTFG
GWHVDEHVPDPFTPENASAAMDSDDGVLPRVPASIAHIAPDPFDPGFDTSAVVARIRARH
TEIKRALLDQTIISGVGNIYADEALWLARLHGTRVTDTLAPKKIRELIDAATDVMAQALK
VGGTSFDALYVNVNGQSGYFERSLNAYGREGQPCRRCGRIMRREHFMNRSSFSCPQCQRR
PRM
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaggtcgagaccgtgcgcctgggcttggccgatcacgttgtcggg
caacggatcaccacggtcgaggtactccacccccgcgcggtacgccgccacgcgggcgaa
tccgccgatctcgcgtcgcggctcgcggggaagaccgtcaccgctgcgcgccgtcgtggc
aaatacctctggctcgacgtcgccgacgacaccgacgacgccgcgctggtcgtccacctc
gggatgagcggccagatgctcatcgcacgggcgggagcacccgaccacacccacctgcgt
atccgcgcacaactcgccgacggcaacgagctgcgcttcgtcgatcagcgtaccttcggt
ggctggcacgtcgacgagcatgtgcccgacccgttcacgcccgagaatgcgtctgctgca
atggattcggacgacggtgtgttgccccgcgtgcccgcgtcgatcgcacacatcgcgccg
gacccgttcgatccgggcttcgacacctcggccgtcgtcgcgaggatccgtgcgcgacac
accgagatcaagagagcactgctcgatcagacgatcatctccggggtcggcaacatctac
gccgacgaggccctctggctcgcccggctgcacggcaccagggtcaccgacacgttggcg
cccaagaagattcgcgaactgatcgacgccgccaccgacgtcatggcacaagcgctgaag
gtcggcggtacatcgttcgacgcgctctacgtcaacgtcaacggacagtccggctacttc
gagcggtcgctcaacgcctatggtcgcgagggtcagccgtgccggcggtgcggacggatc
atgcgtcgtgagcacttcatgaaccgcagttcgttctcctgtccgcagtgtcagcgccga
ccacggatgtga
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