Paraglaciecola psychrophila: C427_0013
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Entry
C427_0013 CDS
T02535
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps03030
DNA replication
gps03410
Base excision repair
gps03420
Nucleotide excision repair
gps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C427_0013
03410 Base excision repair
C427_0013
03420 Nucleotide excision repair
C427_0013
03440 Homologous recombination
C427_0013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gps03032
]
C427_0013
03400 DNA repair and recombination proteins [BR:
gps03400
]
C427_0013
Enzymes [BR:
gps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C427_0013
DNA replication proteins [BR:
gps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C427_0013
DNA repair and recombination proteins [BR:
gps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C427_0013
NER (nucleotide excision repair)
GGR (global genome repair) factors
C427_0013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
PPR_3
HisKA_2
Motif
Other DBs
NCBI-ProteinID:
AGH42125
UniProt:
K6YT30
LinkDB
All DBs
Position
complement(13594..16344)
Genome browser
AA seq
916 aa
AA seq
DB search
MASATKSPSNPLVLVDGSSYLFRAYHVPYLQALSTSYGQPTGAITGVLNMIKSLQKDYPD
GNIVVVFDAKGKTFRNEMYAEYKANRPPMPDDLRTQIAPLHDIIGAMGLPLLVIDGVEAD
DVIGTLANQASNLGMETIISTGDKDMAQLVTAHVRLINTMTNVEMDEAGVLEKFAVRPDQ
IIDYLALMGDKVDNIPGVDKCGPKTAAKWLAEHGTLEQVMAKASSVKGKVGEHLRNALSH
LPLSYELATIKLDVDLPENVQDIKPSEIDYEKLITLSTQFELKRLLTETQQKIKQTSTIQ
NELPEKHNELKVDTNNYQTILTQTDFDTWLEKLKAAELFAFDTETTSLNYMDAELVGVSF
SVAEGEAAYLPVAHDYLDAPEQLNRAHVLATLKPLLENPDIKKVGQHLKYDKNVLANYDI
NLQGIAFDTMLESYVLNSVTTRHDMDSLAEKYLGQSTIHFEDIAGKGVKQVTFNQIPLDK
ASPYAAEDADITLRLHKVIWRKLSEEKDLVNVFKEIELPLSPVLAKMEQFGVLIDSQKLA
QQSQDLAVRILELEKEVHTLAGEEFNLGSPKQLQEILYKKMDLPVLKKTPKGAPSTAEEV
LQELAINYPLPKLLMEYRGLSKLKNTYTDKLPKMINARTGRVHTSYHQAITATGRLSSTE
PNLQNIPIRTEEGRRVRQAFIAREGYKIVAADYSQIELRIMAHLSSDKGLLNAFATGQDI
HTATASEVFDTPLKEVSIEQRRNAKAINFGLIYGMSAFGLSKQLNISRFDAQKYMDLYFE
RYPSVLTYMESTRQIAKEKGYVSTVFGRRLYLPEINASNGMRRKGAERAAINAPMQGTAA
DIIKKAMLAVDDWIDTLPNDDVRMIMQVHDELVFEIKEHKLIEYKNKIISLMEQAVQLDV
PLTVEAGVGINWDEAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgcaacaaaatctccctctaacccactagtattagttgatggttcatcttat
ttattcagagcttaccacgtgccttatctgcaagcgttatcgacctcttacggacagcct
actggtgcaattactggtgtgttaaacatgataaagagccttcaaaaagattatcccgac
ggtaatatagtagttgtgtttgatgccaaaggtaaaacctttcgcaatgaaatgtatgca
gaatacaaagccaatcgtccaccgatgccagacgacctaagaacacaaattgcgcctttg
catgacattatcggggcaatgggactacctttattagttattgatggagtcgaagcagac
gatgtgattggtacacttgctaaccaagcctctaatctcggaatggaaacaattatttct
accggagataaagatatggcacagcttgttacggcccatgtccgattaatcaataccatg
actaatgtcgaaatggacgaagcaggggttctggaaaagtttgctgtaagacccgaccaa
attattgattatctagccttaatgggtgacaaagttgacaatattccaggtgttgacaaa
tgcggacctaaaacagcggctaaatggttagctgaacatggcacacttgaacaagttatg
gccaaggcaagcagtgtaaaaggaaaagttggcgaacatttacgtaatgcattgagtcat
ctgcctttgtcttacgaattagccacaataaaattagatgtcgatttacccgaaaacgta
caagacataaaaccctctgagattgattatgaaaaattaataaccttgagcactcaattc
gagttgaagcgtttgttaacagaaactcaacaaaagataaaacaaacatcaaccatccaa
aatgaattaccagaaaaacacaacgaactaaaagtcgatactaataattatcagactata
ttaactcaaaccgatttcgatacctggttagaaaagcttaaagctgcagaattgtttgca
ttcgataccgaaacaaccagcttaaattatatggatgctgaattagtgggagtatcgttt
tctgtagcagagggtgaagccgcttacttgccagttgctcatgattatttagatgcccct
gaacaacttaaccgagcacatgtattagccacacttaaacctctattagaaaatcctgat
ataaaaaaagtagggcagcatcttaagtacgacaagaatgtacttgctaattacgacatt
aatttacaaggcattgcgttcgatacaatgcttgaatcttatgtgttgaatagtgtgact
acccgtcacgatatggatagtttggcagaaaaatatctcggacaaagcactattcacttt
gaagatattgctggaaaaggtgtaaaacaagtaacgtttaatcaaattccactcgataag
gcatcaccctacgcagccgaagatgcagatataacactaaggttgcacaaggtaatttgg
cgaaaacttagtgaagaaaaagacttagtaaatgtatttaaggaaatagaactgccctta
tctcctgttttagcaaaaatggaacaatttggcgtacttatagacagccaaaaacttgca
caacaaagtcaagatttagcggtgcgtatcttagagttagaaaaagaagtacatacactc
gctggcgaggagtttaatttaggctcaccaaagcaattgcaggaaatcctctacaaaaaa
atggacctccccgtactgaaaaaaaccccaaaaggagcgccatcaactgctgaagaagtt
ttacaggagttggctatcaattacccactgcctaaattgttgatggaataccggggatta
agcaagttaaaaaatacttataccgataaattacccaagatgataaatgctcgaacaggc
agagttcacacgtcttatcatcaagcgattacggcaacgggtagattgtcatctacagag
cctaatcttcaaaacattccgattcgaactgaagaaggacgacgagttagacaagccttc
attgccagagaaggatataaaattgttgctgctgattattcacaaattgaattgcggatc
atggcgcatttatcaagtgacaaaggtttgttgaatgcctttgcaaccggacaagacatt
cacacggcaacggcttcagaagtgtttgatacacctcttaaagaggtcagtattgaacaa
cgtagaaatgctaaagccataaactttggtttaatctacggtatgtctgcatttggcttg
tcaaaacaactgaatatttctcgtttcgatgcacaaaaatatatggatctgtattttgaa
cgttatccatcagttttgacctacatggaaagcacacgacaaatagccaaggagaaaggt
tatgtctcgactgtttttggtaggcgtttatacttacccgaaattaatgccagtaatggt
atgcgcagaaaaggcgcagagcgcgcggcgataaatgcgccaatgcaaggaactgcagca
gacataatcaaaaaagccatgttggcagttgatgattggattgataccttacctaatgat
gatgtgcgtatgattatgcaagtacatgacgaactggtgtttgaaatcaaagaacataaa
ttaatcgaatataaaaacaaaataatatcgttgatggaacaagccgtgcagcttgatgtg
ccactcactgttgaggctggtgtcggaataaattgggatgaagctcattaa
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