Gibbsiella quercinecans: AWC35_13250
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Entry
AWC35_13250 CDS
T05060
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gqu
Gibbsiella quercinecans
Pathway
gqu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gqu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AWC35_13250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gqu03021
]
AWC35_13250
03400 DNA repair and recombination proteins [BR:
gqu03400
]
AWC35_13250
Enzymes [BR:
gqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AWC35_13250
Transcription machinery [BR:
gqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AWC35_13250
DNA repair and recombination proteins [BR:
gqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AWC35_13250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ATA20223
UniProt:
A0A250B1U9
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All DBs
Position
2910844..2911833
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENAAISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactcttggc
aacgcactgcgccgtattctgctttcatctatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggcgtacaggaagatatcctggag
atcctgctcaacctgaaagggctggcggtgagagttcaaggcaaagatgaagttattctt
accctgaataaatctggcattggccctgtgaccgctgccgacatcacccatgatggtgat
gtcgaaatcgtcaagccgcaacacgtcatctgccacctgaccgatgagaacgctgctatt
agcatgcgtatcaaagttcagcgcggtcgtggctatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccaatcggtcgtctgttggttgacgcctgttacagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ctggtaatcgaaatggaaaccaatggcacgatcgatcctgaagaggcgatccgccgtgcg
gcaaccattctggccgaacaactggaagctttcgttgacttacgtgatgttcgtcagccg
gaagtaaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagctgcttaaaacgcctaacctgggtaaaaaatctctt
accgagattaaagacgtgctggcctcccgtggtctgtctctgggcatgcgcctggaaaac
tggccgccggcaagcattgctgacgagtaa
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