Gossypium raimondii: 105761468
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Entry
105761468 CDS
T04129
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105761468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105761468
Enzymes [BR:
gra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
105761468
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
105761468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
105761468
NCBI-ProteinID:
XP_012434911
UniProt:
A0A0D2PTU0
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Position
7:complement(51113032..51119229)
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AA seq
775 aa
AA seq
DB search
METQSPNGSLQKQSLPPKNYGITKPISLAGPSEADIQRNTELEKFLIESGLYESKEEAAK
REEVLGHISEIVKSWVKQLTRQRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCVG
PSYVNREEDFFIILHDILAEMEEVTELQPVPDAHVPVMRFKFQGISIDLLYASISLLVVP
DDLDISRESVLHNVDEQTVRSLNGCRVADQILKLVPNVKHFRMTLRCLKFWAKRRGVYSN
VTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPV
WDPRKNPRDRFHHMPIITPAYPCMNSSYNVSLSTLRVMMEQFQFGNRICEEIELNKAQWS
ALFEPHLFFEAYKNYLQVDIVSADADDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYP
NEYVDTSKQFPHCAFFMGLQRKEGVSGLEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYV
SHVRRRQLPAFVFPDGYRRPRSLRHPSQQTGKTCEDVTTSRSGSAERQIKRKRDDETVDE
KLNKPEKRASISPLRMESVSPDIITSKSVGTSHNSNGQAVKVEHRGTVDLDSLRGQTSLD
IDDSSVVRSVESAEQIGLPFRQELLSPCEVSDFETRETCKAGLNQEKTADSTSAFINDPE
IGSSRRILNWKGVGAEVDQEVVKACNQTAAVEIAESVFGSSSNAQNLNCKGSVCGADLDS
LLEKGHLNASAVFQNSLSEELKPSISVGKVVNSQDGARSETLQKPVMRLSLKSTA
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggagactcagagcccgaacggatctttgcagaaacaatcactgcctccgaagaattat
ggaatcacgaaaccaatatcactcgcggggcctagtgaggctgatattcagcggaatacg
gaattagagaagtttctgatagagtcggggctttacgagagcaaagaggaggctgcgaaa
agagaggaggttcttggccatatctctgagattgtaaaaagttgggtaaagcaattaact
cgtcaaagaggctacactgatcagatggtggaggaagcaaatgctgtcattttcactttt
ggatcataccgtttaggggtgcatggacctggggctgacatagacactttgtgtgttggg
ccatcttatgtgaaccgagaggaagatttcttcatcattttgcatgatattttggctgag
atggaagaagtcactgaacttcaaccggttccagatgctcatgtcccagtaatgaggttc
aagttccaagggatatctattgatcttctttatgcaagtatatctcttttggtcgttcca
gatgaccttgacatctcacgtgaatctgtgctgcataatgttgatgagcaaactgttcga
agtcttaatgggtgcagggttgctgatcaaatccttaaacttgtcccaaatgtcaagcac
ttccgcatgacacttagatgtttgaagttctgggcaaagaggcgtggagtttattctaat
gttactggattcctaggaggtgtaaattgggctcttctagttgctcgtgtgtgccaactt
tatcccaatgcagtacctagcatgctggtttctcgatttttcagagtttatactcaatgg
aggtggccaaaccctgttatgttgtgttcaatagaagaggatgaacttggctttccagtc
tgggatccgcgcaagaatcctcgggaccgtttccatcatatgccaataattactcctgca
tatccttgcatgaattccagttacaatgtctctttaagtacacttcgtgttatgatggaa
cagttccaatttggtaatagaatatgtgaggagattgagctaaacaaagctcaatggagt
gctttgtttgagcctcatcttttctttgaggcatacaaaaactatctacaagttgacata
gtttcggcagatgctgatgatttactggcatggaaaggctgggtagagtctcggcttaga
cagctaaccttgaagatagagcgggacacaaatggaatgttgcagtgtcacccttaccca
aacgagtatgttgatacatccaagcagttcccacattgtgcttttttcatgggtttgcag
aggaaagagggagtgagtggtctagaaggtcaacaatttgacatacgtggaacagttgat
gagttcagacaagagataagcatgtacatgtactggaaaccaggaatggatatttatgtt
tctcatgttcgtaggaggcagctcccagcgtttgttttccctgatggatatagacggcct
cgatcattgaggcatccaagccagcagactggaaaaacttgtgaagatgtcacgacgtcc
cgctcaggctctgcggaaagacaaattaagagaaaacgtgatgatgagacagttgatgaa
aaattgaacaagcctgagaagcgagcctcaattagccccctgagaatggagtcggtttct
ccagatattattacaagcaagtctgttggaacatctcataatagcaatggtcaagcagtt
aaagtagagcatcgaggaactgtggatcttgatagcttacgagggcagacttctttagac
atagatgattcatcagtagttagaagtgtagagtcagctgagcagataggcttaccgttt
aggcaggagttgctttctccatgtgaagtttctgattttgaaacaagagaaacatgcaag
gctggcttgaatcaagagaaaactgcagattcgacatcagctttcatcaatgatcctgaa
attggatcttctaggagaattttgaactggaaaggagtgggtgccgaggtcgatcaagag
gtggtcaaagcatgtaatcaaacagcagcggtagaaattgctgaaagtgtatttgggtca
agttccaatgcgcagaacctcaattgcaagggtagtgtctgcggagctgatttggattca
cttctggaaaaagggcacctgaatgctagtgctgttttccaaaacagcttgtctgaagaa
ttaaagccaagtatctcagttggaaaggttgtaaattcacaagatggagctaggtcagaa
actttgcagaagccagtgatgaggttgagtttgaagtcaacggcataa
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