Gossypium raimondii: 105768256
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Entry
105768256 CDS
T04129
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC105768256
KO
K08770
ubiquitin C
Organism
gra
Gossypium raimondii
Pathway
gra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105768256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105768256
Ubiquitin system [BR:
gra04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
105768256
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
105768256
NCBI-ProteinID:
XP_052486506
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All DBs
Position
5:54415718..54424350
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AA seq
993 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGFXLGMQIFVKTLTGKTITLEVESS
DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
VESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctttgtgaaaacccttactggtaagaccatcacccttgaggtagaaagctcc
gatactatcgataatgtcaaggccaaaatccaagacaaagaagggattcctccagaccaa
caaaggcttatctttgccggaaaacaacttgaggatggccgaactcttgccgactacaac
atccaaaaggagtccaccctccacctagtccttcgtctaaggggtggcatgcagatattt
gtgaaaacccttactggcaagaccatcaccctcgaggtggaaagttctgatacgattgat
aatgtcaaggccaagatccaagacaaggaagggatccctccagaccaacagaggcttatc
tttgcaggtaaacaacttgaagatggccggaccctcgctgattacaacatccagaaagag
tctacgctccaccttgtccttcgtcttaggggtgggatgcagatatttgtaaaaaccctc
accggaaaaaccatcactttggaggtggagagttctgataccattgataatgttaaggcc
aagattcaggacaaggagggtattccaccagatcagcagaggctgatttttgccggaaag
cagctcgaggatgggaggacactagcggattataacatccaaaaggagtcaaccctgcat
ttggtgctgcgactgcgtggtggaatgcagatttttgtgaaaactttgactggaaaaact
attacattggaggtggagagttcagacacaattgataacgtgaaggccaagatccaagac
aaggagggtatcccacctgaccagcagaggttgatttttgctggaaagcaactcgaggat
gggaggacgcttgcggattataacatccaaaaggagtcaaccctgcacttggttctgcgc
cttcgaggagggatgcagatattcgttaagaccttgactggtaaaaccataacactggag
gtcgagagctcggacaccattgacaatgttaaagcgaaaattcaggacaaggaggggatt
cctccagaccagcagaggttgatttttgccggaaagcagcttgaggatgggaggacgctt
gcggactataacatccaaaaggaatccactctgcatttggttttgcgccttagaggaggg
atgcagatattcgtgaagactttgactgggaaaaccatcaccctggaggtggagagctcg
gacacgattgacaatgtgaaagctaagattcaggacaaggaggggattcctccagaccag
cagaggttgatctttgctgggaagcagttggaggatggtcgaactttagcagactacaat
atccagaaggagtccactctgcatcttgtccttcgccttcgtggtggtttctaattgggt
atgcagatctttgtgaaaacccttactggtaagaccatcacccttgaggtagaaagttct
gatactatcgataatgtcaaggctaaaatccaagacaaagaagggatccctcctgaccag
caaaggcttatctttgccggaaaacaactcgaggatggccgaactcttgccgactacaat
atccaaaaggagtccaccctccatctagtccttcgtctaaggggtggcatgcagatattc
gtgaaaactcttactggcaagactatcaccctcgaggtggaaagttccgatacaattgat
aatgtcaaggccaagatccaagacaaggaagggatcccaccagaccaacagaggcttatc
tttgccggtaaacagcttgaagatggccgaactcttgcggattacaacatccagaaagag
tctaccctccaccttgtccttcgtcttaggggtgggatgcagatctttgtaaaaaccctt
actggtaagaccatcacccttgaggtggagagctccgatactatcgataatgtcaaggcc
aagatccaagacaaggaagggattccaccagatcagcagaggttgatttttgccggaaaa
caactcgaagatggtaggacacttgcagattacaacatccagaaagagtctaccctccac
cttgtccttcgtcttaggggtgggatgcagatttttgtaaaaaccctcaccggaaaaact
attacgttggaggtggagagttctgatacgattgataatgttaaggccaagattcaggat
aaggaagggatcccaccggaccagcagaggttgatttttgctggaaagcagcttgaagat
ggccgaactcttgcggactataacattcagaaggaatcgaccctccatttggtgttacgt
ctccgtggtggcatgcaaatttttgtgaagactctcaccggaaagactattactttggaa
gttgagagttctgacaccattgacaatgtaaaagctaagatccaggacaaggaagggatt
ccaccagatcagcagaggttgatttttgctggcaaacagctcgaagatggtaggacactt
gcagattataatatccagaaagagtctaccctccacttggtgctccgacttcgaggaggg
atgcagatattcgtgaagaccttgaccggtaaaaccatcaccctggaggtcgagagctcg
gacaccattgacaatgtcaaagcgaaaattcaggacaaggaggggattcctccagaccag
cagaggttgatttttgccggaaagcagcttgaggatgggaggacacttgcagactataac
atccaaaaggaatcgaccctgcatttggttttacgacttcgaggagggatgcagatattc
gtgaagaccttgaccgggaaaacaatcaccctggaggtggagagctcagacacgatcgac
aatgtgaaagcgaagattcaggacaaggaggggattccaccagaccagcagaggttgata
tttgctgggaagcagttggaggatggtcgaactctagccgactacaatatccagaaggag
tccacactgcatcttgtccttcgcctccgtggtggtttctaa
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