Gossypium raimondii: 105780465
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Entry
105780465 CDS
T04129
Name
(RefSeq) DNA polymerase delta small subunit
KO
K02328
DNA polymerase delta subunit 2
Organism
gra
Gossypium raimondii
Pathway
gra03030
DNA replication
gra03410
Base excision repair
gra03420
Nucleotide excision repair
gra03430
Mismatch repair
gra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105780465
03410 Base excision repair
105780465
03420 Nucleotide excision repair
105780465
03430 Mismatch repair
105780465
03440 Homologous recombination
105780465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gra03032
]
105780465
03400 DNA repair and recombination proteins [BR:
gra03400
]
105780465
DNA replication proteins [BR:
gra03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
105780465
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
105780465
MMR (mismatch excision repair)
DNA polymerase delta complex
105780465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
105780465
NCBI-ProteinID:
XP_012460280
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All DBs
Position
4:28189552..28200136
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AA seq
439 aa
AA seq
DB search
MEVDSQEQLQRKQSTYLSLDENFEIQKEVYRGQQYSQIYFARLHMMRTLLYSLVPNWKSH
LPVCTVLELEEGKECIIFGTLYKHMKLKPCILDEYSKERSVAPLIKPHNFMHQDDYLVLE
DESGRVKLGGTKLSPSVYVTGVVVALHGKETSAGAFFVEDVLEAGLPPQIKRPLKSREDK
YVVFVSGLSIGRSSSNPLQFQLLVDHITGHLGDEEEQGLAAEIVHLVIVGNSVEISRGLL
NGQNLASKDQSRLCEPFKELDILLTQIAASLPLDIMPGSSDPANFALPQQPLNRCLFPGS
TTYNTFKSCTNPHCFELDSIRFLGTSGQNIDDLTKYSEAKDKLDFLERTLRWRHLAPTAP
NTLGCYPFTDRDPFLIDSCPDVYFVGNQEKYETCLLKGLEGQLVRLICIPRFCETGVAVV
LNMRNLECHALTFGTQISS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgactcgcaagaacagctgcagagaaaacaatccacttacctctctttagat
gagaatttcgagattcagaaggaagtttacagaggccaacagtacagtcaaatttacttt
gctcgtcttcacatgatgagaactttgctttactcccttgtgcccaactggaaatcccat
ctccccgtttgtacagttttagagctcgaagaaggcaaagaatgcatcatttttggtact
ctttacaagcatatgaaactcaaaccttgcattcttgatgaatactctaaggagagatct
gttgcccctcttataaagcctcataattttatgcatcaagatgactacttggttttggaa
gatgaaagcggacgagtgaagcttggtggtactaagctttcaccctcagtttatgtaaca
ggtgttgttgttgcgttgcatgggaaggaaaccagtgcaggagccttctttgttgaagat
gttctcgaagctggcttaccacctcagattaaacgaccgctaaaatcaagagaagacaag
tatgttgtttttgtctctgggcttagcatcgggaggagctcctctaatccccttcagttt
cagcttcttgttgatcacataacagggcatctaggagatgaggaggagcaaggacttgca
gcagagatagttcatcttgtgattgttgggaactctgttgaaatttctcgtggacttctt
aatggacagaatttagcttcaaaggatcagtcaaggttgtgtgagccatttaaagagctg
gatattctgttaactcagattgctgcaagtttgccattggatatcatgcctggatctagt
gaccctgcaaattttgccttacctcagcagcctttgaacaggtgccttttcccagggtca
acaacttataacacttttaagtcctgcactaatcctcattgttttgagcttgatagcatc
agatttcttggaacatcaggtcagaacatagacgatctcactaagtactcggaggcgaag
gataaacttgacttcttggaaaggactttaagatggaggcatctggcaccaaccgcaccg
aatactcttggttgttatcctttcactgatcgggatcccttcctaattgatagctgtcct
gatgtttactttgttggtaatcaggaaaaatatgaaacttgcttgttaaaagggttggaa
gggcaattggtaagacttatttgcattcctagattctgtgaaactggagttgctgttgtg
ctcaacatgagaaatctagaatgccatgcactaacttttgggacacaaatcagctcataa
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