Gossypium raimondii: 105782614
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Entry
105782614 CDS
T04129
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gra01002
]
105782614
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105782614
04121 Ubiquitin system [BR:
gra04121
]
105782614
Enzymes [BR:
gra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105782614
Peptidases and inhibitors [BR:
gra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105782614
Membrane trafficking [BR:
gra04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
105782614
Ubiquitin system [BR:
gra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105782614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF6548
Motif
Other DBs
NCBI-GeneID:
105782614
NCBI-ProteinID:
XP_012462916
UniProt:
A0A0D2VGW5
LinkDB
All DBs
Position
13:47736076..47741635
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AA seq
573 aa
AA seq
DB search
MEQETSMRAIIRNWKHGYRALLHMRWAADFGFHISVVGLVGVVGFVLAIIRDGKLGEKRK
KHLEKLCLVPGLQNLGNNCFLNVILQALASCSYFQSFLQKILDECESTLVDRQGESLPLT
ITLSDLLEELGMAGERRVALSPHKVMSALSLYIQNFDLTSQQDAAEAFLHLLSSLREEFS
DIYLPNQSTLADIFASQTSRILTPERKEVQNEQKRWQQHYLGPFDGIIGSILSCRSCSYQ
ISLDFQFFHSLPLFPVLYGASTIMAGCTLEDCLWQFVLAEKLENYYCSHCWHSAAIKFLS
CKGANEIEIEKLKRCSAEESCDCRSFCCLENLPWSNNFSNTLKQLCIARCPKILCLHLQR
ASINEVGELIKLQGHIAFPLILDLSPFMTTEVEITNWEGVHKGQLKLQNQKTRPHLNLIN
AQYESILNRISKPTGEKVSSEILVANGSQCTTSPGESLPEKSKLYPTDGCSKASNIDMHE
QHNDKVSLTSKLPPSETKLYRLASVVEHFGRPGGGHYTVYRSMRTKSDEVDSDEYSEPAT
TKWFCISDSQVCSVSEKDVLAAEASLLFYERIV
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagaaactagtatgagggcaataatccgcaattggaaacatggttatagagct
ttgttgcatatgagatgggctgctgattttgggtttcatatatctgtggttggtttagtg
ggagttgttggttttgtattggctataataagagatggtaaattgggggaaaagagaaaa
aaacatttggagaagttatgcttagttcctgggttgcaaaatcttggcaataactgcttc
ttgaatgtaatattgcaggctctggctagctgctcatattttcagtcttttcttcagaag
atactagacgaatgtgaatcaacactagttgacagacagggtgaaagcctgccacttaca
attactttatctgatctcttagaagaattaggcatggctggagaaaggagagtcgcatta
agcccacataaagttatgagtgcattgtcgctttatattcaaaattttgatttaacaagc
cagcaggatgcagctgaagcgtttctccatcttttgtcttcactaagagaagaattttct
gatatatatcttcccaatcaaagtactctagcagatatttttgcttcgcaaactagtagg
attctaactccagagaggaaggaggttcagaatgagcagaaaagatggcagcaacactat
cttggaccttttgatggtataattggtagcattttatcttgccgcagttgttcatatcag
atttctttggattttcaattttttcacagcttgcccctttttccagtgctttatggtgct
tccaccattatggctggatgtaccttggaggattgcttatggcagtttgtccttgctgaa
aaacttgagaattactactgcagccattgttggcacagtgctgcaataaagtttttatct
tgtaaaggagcaaatgagattgagattgaaaagttgaagagatgcagtgcagaagaatcc
tgtgattgtcgtagtttttgctgtctagaaaatctaccctggtcaaataacttttctaat
actctaaagcagctatgtattgctcgttgtccaaagattctatgtcttcatctacaacgt
gcttcaattaacgaggtcggggaactaatcaagcttcagggccatattgcttttccattg
attttagacctgtcaccattcatgactactgaggtggaaataacgaactgggaaggggtc
cataaagggcaactgaagctgcaaaatcaaaagacaaggcctcatctcaaccttatcaat
gcccaatatgaaagcattctcaatcgcatcagtaaaccaacaggagaaaaggtctcttca
gaaatattagttgcaaacggctctcaatgtactacttcccccggagaatctttgcctgag
aagagtaagctgtacccaactgatggctgttcaaaggcctccaacatagacatgcatgag
caacataatgacaaggtaagtttgaccagcaagttacctccttcagaaactaaattatac
cgacttgcttcagttgtggagcactttgggagacctggaggtgggcattacactgtttac
agaagtatgagaactaaatctgatgaggtagattctgatgaatactccgagcctgctaca
accaagtggttctgcatttcagattctcaagtatgtagtgtctccgagaaggatgtttta
gctgcagaagcaagcttacttttctatgagaggatcgtataa
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