Gossypium raimondii: 105798283
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Entry
105798283 CDS
T04129
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gra03036
]
105798283
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
105798283
REST complex
105798283
Heterochromatin formation proteins
Other heterochromatin formation proteins
105798283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
105798283
NCBI-ProteinID:
XP_012483743
UniProt:
A0A0D2RW38
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All DBs
Position
9:7123592..7133554
Genome browser
AA seq
1360 aa
AA seq
DB search
MKRIRDDIYSGSQFKRPFTSSRAESYGQNQMPGGGGGTGGGEGGGGGAGGGGSMSQKLTT
NDALTYLKEVKEMFQDQKEKYDMFLEVMKDFKAQRTDTAGVIARVKELFKGHNNLIYGFN
TFLPKGYGITLDEDEAPPKKTVEFDEAISFVNKIKKRFQNDEHVYKSFLDILNMYRKEHK
DINEVYTEVASLFEDHPDLLDEFTRFLPDSQAAPMTQQVPYGRNSTQHYNERSSATPTLR
QIQMDKQRRRDRSITSNADRDLSVDRPELDDDKAVIKVQKEQRKRVEKDSRDQRIRDHDD
PEHDNNRDFNLQRFPDKKRSGRKVEGFASYDDRDTFKSMCNQGFVFCEKVKERLCNSDDY
QAFLKCLNIYSNGIIKRNDLQNLVTDLLGKYPDLMNEFNQFLERCENTDGLLAGVINKKS
LTVVGHAPKSEEKREIEAAKEKERYKYMGKSIQELDLSNCQSCTPSYRLLPDDYPIPIAS
QRSELGALVLNDNWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAK
RAEDLLNSINENKINLDSPFHVEEHFTVLNLRCIERLYGDHGLDVMEILRKNPALALPVI
LTRLKQKQEEWTKCRLDFNKVWAEIYSKNHYKSLDHRSFYFKQQDSKNLSVKSLVAEIKE
LKEKNQKEDDVLMASVAGHRQPPAPHLEYEYVDVNIHEDLYKLIEYSCEEMCSTKEQLNR
VMRLWTTFLEPMLGVPPQRNGRKGTEGAGKAQNSAVNGTASSIAESDGSPGADATVNSGQ
PKAASNGDGNSSSELTNSCRNGLTNRETLAKDEHSVRVSRVDSKPEKEIKFTADKRPGIN
MVAIGIKAENNQGRSNVEGTSGPGAAASRPTSITAGEAHESEANVDPVHSSEGVTVAKHP
LIVNGTPTDGSNASRYHEESTGPSKVEKEEGELSPNGDFEEDNFVAYGDAGPKVVPKAKH
GVESRQQRSGNGKDLHSVDAGGENDADADDEDSENASEAGDDASGSESAGDECSHEEEEE
VERDEVDGKAESEGEAEGIADAHVGGDGTSLSFSERFLFTVKALSKHVPPALPEDEKYNS
WVFYANDDFYVLFRLHQILYERILSAKTNLAGGEIKWKHLKDTSSSDLYARFMSALYSLL
NGSTDNTKFEDECRAIIGNQSYVLFTLDKLIYKLVKQLQAVAANEMDNKLLQLYEYEKSR
KHWKTMDSVYYENARVLLHEENIYRLKCSSLPSRLSIQLMDNVIEKPEAFAVSMEPNFSA
ILHNDFLSVFPGKKEPHGIILKRNKKNYANLDEFDATCMAMEGVELVNGLENKIACNSYK
ISYVLDTEDFFFRRRNSSRRRSRSNQARIQRFLRFLSTTQ
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaataagagatgatatatattctggttctcaatttaaacgcccatttacttct
tcaagggctgaatcctatgggcaaaaccaaatgcctggtggaggtggcggtacaggtgga
ggggaagggggaggaggaggagctggaggagggggaagtatgtcgcagaaactgactaca
aacgatgccttaacatatttaaaggaagtcaaggagatgtttcaggatcaaaaagagaag
tacgacatgttccttgaagtcatgaaggatttcaaggctcaaaggactgacactgctggt
gtcattgcccgagtgaaagagttattcaaagggcataacaacttgatttatggatttaat
acctttttgccaaagggatatggaattacccttgacgaggatgaggctcctccaaaaaag
actgttgaatttgatgaagcaatcagttttgtaaacaaaataaagaaacgtttccaaaat
gatgagcatgtttataaatcatttctggatattttgaatatgtaccggaaggagcacaag
gacataaatgaggtctatactgaggttgcttctctttttgaggaccatccagatcttctt
gatgagttcacaagatttttgccagattctcaagcagcacctatgacccaacaagttcca
tatggtcgaaactcaactcagcattataacgagcgaagctctgctacacccaccttgcgg
caaatacaaatggataagcaacgtcggagggataggagtattacttccaatgctgatagg
gatctcagtgttgaccgtcctgaactggacgatgacaaagctgttataaaagtgcaaaag
gagcagagaaagcgcgtggaaaaggacagtagggatcagagaattcgtgatcacgatgat
cctgagcatgacaacaatagggattttaacttgcaacgttttcctgacaaaaagagatcc
ggaaggaaggttgaaggatttgcttcttatgatgacagggatactttcaaaagcatgtgc
aaccaagggtttgtattctgcgagaaagttaaggagaggctatgcaactcagatgactac
caggcgttcttaaagtgccttaatatttatagcaacggaataatcaaaagaaatgatttg
caaaatttggtgactgatttacttggcaagtatccagatcttatgaatgaattcaatcag
ttcttggagcgttgcgagaatacggatgggcttcttgctggtgttattaataaaaaatct
cttacagttgttggacatgcacccaagtcagaggaaaaacgtgaaattgaggcggctaag
gaaaaggagagatataagtatatgggaaaatcaatacaggagcttgacctttctaactgc
caaagttgtactccaagctatcggcttctgcctgatgattacccaatacctatcgcaagt
cagagatctgagctcggcgctctagtgctgaatgataattgggtatctgtgacttcagga
agtgaggattattcttttaagcacatgcgccgaaatcaatatgaagagagcttgttcaga
tgtgaggatgataggtttgagctggatatgttgttagaatccgtgagctcaacagccaag
cgtgccgaggacttgctaaatagcattaatgaaaataaaataaatttggattctccgttc
catgttgaagaacacttcactgttctaaatttaaggtgcattgagcgtttatatggtgac
catggtcttgatgtgatggaaatattacgtaaaaatcctgctcttgcattacccgtcatt
ttaactcgcctgaagcagaagcaagaagagtggacgaagtgccgtttagacttcaacaag
gtttgggctgaaatttattcgaaaaaccattacaaatcgcttgatcaccgcagcttctat
ttcaagcagcaggattcaaagaacttgagtgtgaaatctttagtggctgaaatcaaggag
ttgaaagagaagaaccagaaagaggacgatgttcttatggctagcgttgctggtcaccga
caaccccccgctccacaccttgaatatgaatatgtggatgtcaacattcatgaggaccta
tataaacttatagaatattcatgtgaagagatgtgctcaacgaaagaacagttaaatcga
gtaatgaggctgtggaccactttcttggaaccaatgttgggtgtgcctcctcaacgtaat
ggcagaaagggcactgaaggtgctggtaaagcgcagaattctgctgtaaatggcactgca
tcaagcattgctgaaagtgatgggagccctggagctgatgctactgtaaattcagggcaa
ccaaaggctgctagtaatggagatgggaacagttcttccgaactaacaaattcttgcaga
aatgggttgacaaacagggaaactttagcgaaagatgaacactcagttcgtgtctccaga
gttgattcgaagccagagaaagagattaaatttacagctgataaaaggcctggaattaac
atggttgctattggaatcaaagcagaaaataatcagggccgaagcaatgttgaagggaca
tcaggtcccggtgcagctgcatctagacctactagcattactgctggtgaggctcatgaa
tctgaagctaatgttgatcctgtacattcatcggagggtgtcactgtagcaaaacatcct
ttaatagtaaatggaacgcctacagatggctctaatgctagcagatatcacgaagaatcc
actggtccctccaaagtcgaaaaagaagaaggtgaattatcacctaatggtgattttgag
gaggataattttgttgcctatggtgatgctggtccaaaggtagtgccgaaggcaaagcat
ggtgttgaaagcagacaacagcgatctggaaatgggaaagatttgcattccgtggatgct
ggtggagaaaatgatgcggatgctgatgatgaggatagtgaaaatgcctcggaggctggt
gatgatgcatcgggcagcgagtctgcaggtgatgaatgctcccatgaagaggaggaagag
gtcgaacgtgatgaagttgatggtaaggctgagagtgaaggtgaagccgaaggaattgct
gatgcacatgtgggaggagatgggacctccttgtcattctcggaacgttttctttttaca
gtgaaggctctttcaaagcacgtaccaccagctttacctgaagatgagaaatacaattct
tgggttttttatgcaaatgacgatttctatgttcttttcagacttcatcaaatcctgtac
gaaagaatactttcggcaaaaacaaatttagccggtggtgaaataaaatggaaacatttg
aaagacactagttcttcagatttatatgccagatttatgagtgcattgtacagtctgctc
aatggatcgaccgataatacgaagtttgaggatgaatgccgagctataataggaaaccag
tcatatgtgttattcacattggacaagttgatatataaattggttaaacagcttcaagct
gttgcagcgaatgagatggataataagcttcttcaattgtatgaatatgaaaaatcccgg
aaacattggaagacaatggattcagtttattacgagaatgcacgtgtcctcctccatgag
gagaatatatatagactgaaatgctcatctttgccatctcgtttgtctattcagctgatg
gacaatgtcattgaaaagcccgaagcatttgctgtttccatggaacctaatttttcagcc
attttgcacaatgactttctgtcagtctttcccggaaagaaggaaccacatggcatcata
ctaaagagaaacaagaagaactacgcaaatctagatgaatttgatgctacttgcatggcc
atggaaggcgttgaactggttaacggtttagagaacaagatagcttgcaactcatacaag
atatcttatgtattggacactgaagatttcttctttcgtagaagaaattcatcacggcgc
agatcacgcagtaatcaggcaagaatacaacggttccttagatttttatccactacacaa
taa
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