Granulicella sp. WH15: FTO74_16975
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Entry
FTO74_16975 CDS
T06415
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
grw
Granulicella sp. WH15
Pathway
grw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
grw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FTO74_16975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grw03019
]
FTO74_16975
Enzymes [BR:
grw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FTO74_16975
Messenger RNA biogenesis [BR:
grw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FTO74_16975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
GRP
Motif
Other DBs
NCBI-ProteinID:
QHN04864
UniProt:
A0A7L5AB94
LinkDB
All DBs
Position
complement(4111185..4112741)
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AA seq
518 aa
AA seq
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MLEPQTQNLSQNQTENTSPTSPATLPVQETITGTNAELDPATGLPMVRDVHFADFNISDS
LKQRLAAGGFNTPTPVQAKAIPPALEGRDILATASTGTGKTLSFLIPMIERMDANSVPSS
KGKRGPIRSLILLPTRELAMQVLEAYGKIVPHAKNDSVLVCGGLSENTQLDHLSRGPRLV
VATPGRLEDFLRRRSVNLSSVEMLVLDEVDRMLDMGFLPAIKRIVGALPKTRQTMCYSAT
LDANISEIVRDYVQKPVRIEIGTTSKPSDRVELRVYSVMQDQKLGLLNQMLNEEEGTFLV
FSRTKHGADRISKKLEKLGHQADVIHGDRSQSQRTAALKGFASGRHRVLVATDVAARGID
VSNIAHVVNYDLPNASEDFVHRIGRTGRAGKKGVATTFVMPQERSDARKLERELKIKFEW
READKNLEKEERNRPLDTAALGDVMQLESRAWRTGDVSAQGQVASAASPYRGGAGNGFRG
RSGGGGFGGGRGQGGGRGPGSNSRPGGGRSGGPARRGR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaccccagactcagaacctgtcccagaaccagaccgaaaacacctccccaacc
tcccccgctacccttcctgttcaggagaccatcaccggcaccaacgccgagctggacccg
gcgaccggccttcccatggtgcgggacgtacactttgccgacttcaacatctccgactcg
ctgaagcagcgtctggcggcgggcggtttcaacacgccgaccccggtgcaggcgaaggcg
attcctccggcgcttgagggccgcgacattctcgcgaccgcttcgaccggaaccggcaag
accctcagcttcctcatcccgatgatcgagcggatggatgcgaactcggtgccgtcgtcc
aagggcaagcgtggaccgatccgctcgctgatcctgctgccgacgcgtgagctggcgatg
caggtgctcgaggcgtacggcaagatcgttccccatgcgaagaacgactcggttctggtc
tgcggcggtctctcggagaacacgcagctcgatcacctgagccgcgggccgcggctggtc
gtcgcgacgcctggacgtcttgaggactttctgcgccgccgctcggtgaacctcagctcg
gtggagatgctggtgctcgacgaagtggaccggatgctcgacatgggcttcctgcccgcg
atcaagcggatcgtaggcgcgctgcccaagacgcggcagacgatgtgctactcggcgacg
ctggatgcgaatatctcggagatcgtgcgcgactacgtgcagaagccggtgcgcatcgag
atcggtacgacctcgaagccttcggaccgcgtggagctgcgcgtttacagcgtgatgcag
gaccagaagctcggcctgctgaaccagatgctgaatgaagaagagggcacgttcctggtc
ttctcgcggaccaagcatggcgcggatcgcatctcgaagaagctggagaagctggggcat
caggcggatgtgatccacggcgatcgctcgcagtcgcagcggacggcggctctgaagggc
ttcgcgtcggggcgtcaccgcgtcctggttgcgacggacgtggcggctcgtggaatcgac
gtctcgaacatcgcgcatgtcgtgaactacgacctgcccaatgcttctgaggactttgtg
caccgcatcggccgtacgggccgcgcgggcaagaagggcgtcgccaccacctttgtgatg
ccgcaggagcggtcggatgcgcgcaagctggagcgcgagctgaagatcaagttcgagtgg
cgcgaggcggacaaaaacctggagaaggaagagcgcaatcggcctctggatacggctgct
ctgggcgacgtgatgcaactcgagtcgcgtgcgtggcggacgggcgatgtgtcggcgcag
gggcaggtggcttcggccgccagcccgtatcgcggcggggccggcaacggcttccgtggg
cgtagcggtggtggcggctttggcggcggacgcggacagggtggcggacgtgggccgggt
tcgaacagccgtcctggtggtggtcgttcgggtggtcctgctcggcgcggtcgctaa
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