KEGG   Geoalkalibacter subterraneus: GSUB_05440
Entry
GSUB_05440        CDS       T03585                                 
Name
(GenBank) hypothetical protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
gsb  Geoalkalibacter subterraneus
Pathway
gsb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:gsb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    GSUB_05440
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gsb02044]
    GSUB_05440
Secretion system [BR:gsb02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   GSUB_05440
SSDB
Motif
Pfam: Phage_GPD Phage_base_V DUF2345 Sarcoglycan_1 Cthe_2159 DUF6484
Other DBs
NCBI-ProteinID: AJF06119
UniProt: A0A0B5FND3
LinkDB
Position
1211079..1213142
AA seq 687 aa
MSFISAAWDASSHRADAQQYFFRVQGVPDGTLAVKDFSGSDHGLSQDYCFTINLFSESFL
DVGLAVGRKGTLEMAWEGRMLPLHGVVSEISYVGEAVGGHAYVVRLNSVLHPLKLRRDNR
VFLNTTAPQIIEEILQGAGFSETDYELELDGDYPFREFVVQYDESDWDFLLRICAHVGIF
FRFSQNGEGVRIVFHDRVDDLPACACGELLYEVQSGTRRGRETVFALRERSNLLSAQVEL
KDYNDQTPEAHLSAHASSSGGNGRDYRYGEHFLDLEQGQQLARMRGQLLDWQRRTLVAET
DCRALAPGEILSITGHSDEGLNGDYLIVELEHDGDQSAGFAFGDSGKGMSYRNRLLLTRA
GTPYRPPLPAARPMHGLLTARIETTGGEYAYLDEQGRYRLRTDFDLSETAPGEASHPVRM
VQPYAGRDYGFHFPLHAGTEVVISCVNGDLDRPVILGALPNPDTPTPVTSANRTQNILRT
WGGNELLMDDRAGREKTELFTRERKNILSLDADCDGHRVRLASEEGEMEVYAAKTMLLES
GDSQFVEVGKDQIVTVENAQRLMTRTGEIEQQAATDIRMKAGENILMQSDRQDIEMRSGR
DLVAEVGRNLSMEVRSEDFDLQVTQGKISINAARAITVTGQGGGAIRIGQSGGGIEITAG
GDVIISGGSVEVNAGMISLKGGKIGSN
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgtcattcatttctgcggcttgggacgcctcgtctcacagggctgatgcccagcagtat
ttcttccgtgttcaaggcgtgccggatgggaccctggcggtgaaggatttcagcgggagc
gaccacgggttgtcgcaggattactgttttaccatcaacctgttctctgaaagcttcctg
gatgtggggcttgccgtcgggcgcaagggtacgctcgagatggcatgggaagggcggatg
cttccacttcatggggtcgtcagtgaaatctcctatgtgggggaggccgtcggcggccac
gcgtatgttgtgcggctcaactctgttcttcacccccttaaattgaggcgtgacaaccgg
gtttttctcaacaccaccgcgccgcagatcatcgaggagatcctgcagggagccggcttc
agcgagaccgactacgaactggagcttgacggcgactatcccttccgcgaattcgtggtg
cagtacgatgagagcgattgggattttctcctgcgcatctgcgctcatgtgggcatcttc
tttcgattctcccagaacggggagggggtacggatcgtctttcacgaccgtgttgacgat
ctgccggcctgcgcctgcggcgaactgctctatgaagttcagagtggcactcgccgcggc
cgcgagacggtatttgccctgcgtgagcgctccaacctgctgagcgcgcaggtcgaactc
aaggattacaacgatcagacccccgaagcgcatttgtcggcccatgcctcatcgtctggc
ggcaatgggcgtgactaccgctacggagaacattttctcgacctcgagcaggggcagcag
ctggcccggatgcgcggtcaactgctggactggcagcgccgcaccctggttgccgagacg
gactgccgggccctggcgccgggagaaattctgtccataaccggtcactcggatgaagga
ctcaacggagattatcttatcgtcgagctcgaacatgatggcgatcaaagtgccggtttc
gcttttggggacagcggcaaaggcatgagctaccgcaacaggctgctgctgactcgcgct
ggaacgccctatcggcctcccttgcccgccgcgcgtccgatgcacggcctattgacggcg
cgcatcgagacgactggcggtgaatatgcctatctcgacgaacaggggcgctaccgcctg
cgcaccgatttcgatctcagcgagacagcccccggcgaggccagtcacccggtgcgcatg
gtgcagccctacgccggcagggactacggtttccatttccctttgcatgccggcaccgag
gtggtgatttcctgtgtcaacggtgatctggaccggccggtgattcttggtgccctgccc
aaccccgatacgcctacgccggtaaccagcgcaaaccgcacgcagaacatcctgcgcacc
tggggcggcaatgagctgcttatggacgatcgcgccggcagggaaaaaaccgaactcttc
acccgcgagcgaaagaacatcctgagccttgacgccgactgcgacgggcatcgcgtgcga
ctggccagcgaagagggcgagatggaggtctatgctgccaaaacgatgctgctcgaatcg
ggcgacagccagttcgtcgaggtgggcaaagatcagatcgtcaccgtggaaaacgctcag
cgcctgatgacccgcacaggcgagatcgagcagcaggcggccaccgatatccgcatgaag
gccggagaaaacatcctcatgcagagcgaccggcaggatatcgaaatgcgcagcggccgc
gaccttgtcgccgaagtcggacgcaacctgtctatggaggtgcgaagcgaagatttcgat
ctccaggtcactcaggggaaaatcagcatcaacgcggcccgcgccatcacagtgacgggg
cagggaggtggtgccatccgcattggccagagcggcggaggcattgagatcaccgccggc
ggggatgtgatcatcagcggcggcagcgtcgaggtcaacgccggcatgataagccttaag
ggcggcaaaatcggcagcaattga

DBGET integrated database retrieval system