Geoalkalibacter subterraneus: GSUB_12980
Help
Entry
GSUB_12980 CDS
T03585
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb00470
D-Amino acid metabolism
gsb00550
Peptidoglycan biosynthesis
gsb01100
Metabolic pathways
gsb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GSUB_12980
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GSUB_12980
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GSUB_12980
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gsb01011
]
GSUB_12980
Enzymes [BR:
gsb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
GSUB_12980
Peptidoglycan biosynthesis and degradation proteins [BR:
gsb01011
]
Precursor biosynthesis
Amino acid ligase
GSUB_12980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
RimK
ATP-grasp_3
CPSase_L_D2
GARS_A
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AJF07288
UniProt:
A0A0B5FIU8
LinkDB
All DBs
Position
complement(2776766..2777692)
Genome browser
AA seq
308 aa
AA seq
DB search
MMRAELKSKQIAVLMGGWSGEREVSLRTGKAVLKALQGSGYQACGIDVGRDLPQQLHDAG
ADVAFVALHGRFGEDGTVQGLLEMMGVPYTGCGVLSSSLTMDKIATKKILVYHDVPTPDF
KVVRRGDDLEPLMTQCTDFPLVVKPCREGSTLGVTIAHDRESLHKGLQDALKFDTRVLVE
EYIPGREVTVSVLDGEALPIIEVVPRGGFYDFNAKYVAGSTEYLLPAPLEPALYRRIAHA
AVTACDALECRGAVRADFRVRENDFYCLEVNAIPGMTETSLLPKAAAEAGIAFDELVQRI
LEGAALDK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgagcggaattgaaatccaaacagatcgccgtccttatgggcggctggtccggt
gagcgggaagtctccctgcgcacgggaaaggccgtgctcaaggctttgcagggcagcggt
tatcaggcctgcggcatcgatgtcgggcgtgatctcccccaacagcttcacgacgcaggg
gcggacgtggcctttgtcgctctacacggtcgattcggtgaggacgggaccgttcagggg
ctgctggagatgatgggggttccctataccggttgcggtgtcttgtccagcagcctgacc
atggacaaaatcgccaccaagaaaatcctcgtctatcatgatgtgccgacgccggatttc
aaagttgtccgcaggggcgatgatctggagccgttgatgacccaatgcactgattttccc
ctggtggtgaagccctgcagggagggatcgacgctgggagtgaccatcgcccatgaccgg
gaatccctgcacaaggggctgcaggatgcgcttaaatttgatacgcgggtactggtggaa
gaatacattcctgggcgggaagtgacggtcagcgttcttgacggagaagctctgccgatc
atcgaggttgtccctcgcggcggtttttacgatttcaatgccaaatacgtcgccggctcc
acagagtatctgctgcctgcgccgctggaaccggccctctaccggcgtattgcacatgcg
gcagtcactgcatgcgacgcactggagtgtcgcggcgcggtgcgggccgattttcgggtc
agggaaaacgatttttattgccttgaagtcaacgcgatccccggaatgacggagaccagc
ctgcttcctaaggccgcggccgaggcagggattgcattcgatgagttggtacagcgtatt
cttgaaggagcggcgctcgataaataa
DBGET
integrated database retrieval system