Glycine soja (wild soybean): 114368341
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Entry
114368341 CDS
T06057
Name
(RefSeq) histone deacetylase 19-like isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03082
ATP-dependent chromatin remodeling
gsj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114368341
03083 Polycomb repressive complex
114368341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114368341
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114368341
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
114368341
HDAC complexes
Sin3A-HDAC complex
114368341
BRAF-HDAC complex
114368341
REST complex
114368341
SHIP complex
114368341
MiDAC complex
114368341
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
114368341
Heterochromatin formation proteins
Other heterochromatin formation proteins
114368341
Chromatin remodeling factors
NuRD complex
114368341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
114368341
NCBI-ProteinID:
XP_028181454
LinkDB
All DBs
Position
1:complement(57221038..57228651)
Genome browser
AA seq
497 aa
AA seq
DB search
MESGGNSLPSGSDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VLKPMAAKDRDLCKFHADDYVAFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGALKLNHGVCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKIHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYAKGKYYSLNVPLDDGI
DDESYQSLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCFETSVALGIELDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRQLLDEIRAKLLDNLSRLQHAPSVPFQERPPDAELLERDEDQDDRDERWDPDSDREV
GDDSNPVRRRVKSECVDAEDKDTESYHKHLDCGRDYLTPFKEISCSKVSGVDSMAVDEPC
IKEEQDNLKELSDHRPR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtggagggaactcccttccatcagggtcagatggtgtgaagagaaaggtttca
tatttctatgatccagaggttggaaactattattatgggcagggacacccaatgaaacca
cacaggattcgaatgacacatgctcttttagcccactatggattgcttcaacacatgcag
gttctgaagcctatggctgctaaagatagggacctttgcaagttccatgctgatgattat
gtggcctttctgagaggcatcacccctgaaacgcagcaagatcaattgagacagctgaag
aggtttaatgttggcgaagactgccctgtatttgatggtctttactctttctgccagaca
tatgcaggaggttctgttggtggtgctctaaagttgaaccatggagtatgtgatattgca
ataaattgggctggtggtctacatcatgcaaagaagtgtgaggcttctgggttttgctat
gttaatgacattgtgctggctattttggaacttctcaaaatacatgagcgtgttctgtat
gtggacattgatatccaccatggtgatggtgtagaggaggccttttacaccaccgatagg
gtcatgactgtttcgtttcataagtttggggattactttcctggaacaggtgatattcgt
gatattggatatgctaaagggaaatattattcactaaatgttcccttggatgatggaatt
gatgatgagagctatcagtccttgtttaagccaataatgggaaaggttatggagattttt
aggcccggtgctgttgtattacaatgtggtgctgactctttatctggggacaggttaggt
tgtttcaatctttccataaaaggtcatgcagagtgtgtcagatatatgagatcttttaat
gttccccttctattgctcgggggaggtggctatacaataagaaatgtggcacgttgttgg
tgtttcgagactagcgttgctcttgggattgaactagatgataagatgcctcaacatgaa
tattatgaatattttggtcctgactatactcttcatgttgctccaagtaacatggaaaac
aagaactcccgacaattattggatgaaataagagcaaaacttcttgataatttatctagg
cttcaacatgcaccaagtgtcccattccaggaacggccacctgatgcagagcttctagag
agagatgaagatcaagatgatagagatgaaagatgggatcccgattctgacagggaggtt
ggcgatgacagcaatcctgttcgcagaagggtgaaaagtgaatgcgttgatgctgaggat
aaagatacagaaagttatcataaacatctagattgtggaagagattatcttacgcctttc
aaggagatttcatgctccaaggtgtcgggggtggactcaatggcagtggatgaaccatgc
atcaaagaggagcaggataatttaaaagagctttctgatcacaggccaagatga
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