Glycine soja (wild soybean): 114379337
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Entry
114379337 CDS
T06057
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Module
gsj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114379337
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
114379337
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
NosD
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
114379337
NCBI-ProteinID:
XP_028193780
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Position
12:894077..897258
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AA seq
440 aa
AA seq
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MSPQTPTIPLFVVLASLVLCNGYYLEESFYKTNAKHYPVHDGRLIKTKHEHFGLITRANR
ATHLTSRPRGTVSVDDFGAKADGSDDSEAFGKAWNEACSRGAILVVPENRIYRLKPIIFS
GPCRPNTAFMLYGTIEAWSQMSAYQEDRQHWIVFDSVSNFRVGGGGTFNGKGKRWWQSSC
KVNTNLPCNDGPRPKAVTFYQCNNLKVTNLRFKDAPQMHVVFEGCFNVIVSNLVIRAPGD
SPNTDGIHVADTQNIVISNSDIGTGDDCISIISGSQNVRATDITCGPGHGISIGSLGADN
SEAEVSNVVVNRATLTGTTNGVRIKTWQGGSGYARNIKFLNIAMQNVTNPIIIDQYYCDQ
SKPCQEQDSAVQLSNVLYQNIKGTSASEVAIKFDCSRAVPCRQIYVQDVILEPQGHGGTI
ATCEHVSYVNRGKFFPQCTP
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtctccacaaacgccaactatcccacttttcgttgtcctcgcttcattagtcttatgt
aatggctattacttagaggaatcattttataaaacaaatgctaaacactaccctgtgcat
gatgggagattgatcaagacaaaacacgaacattttggtctaataacaagggctaataga
gctacccatcttacttctaggcctcgtggaacagttagtgttgatgactttggagccaaa
gcagatggaagtgatgacagcgaggcatttgggaaggcatggaatgaagcatgttctaga
ggggctatccttgtggtacctgaaaataggatctatcgtcttaagccaataatattttct
ggtccatgtcgacccaacactgcctttatgctctatggaacaatcgaggcatggtctcaa
atgtcggcataccaagaagatagacaacattggattgtgtttgatagtgtttcaaatttc
agagttggtggtggtggcacattcaatggcaaagggaaaaggtggtggcaaagctcctgc
aaagtcaacactaaccttccatgcaacgacggaccaagaccaaaagccgtgactttctat
caatgcaacaatttgaaagtgacaaacctgaggtttaaagatgcaccgcaaatgcatgtg
gtctttgaaggatgcttcaatgttattgtttcgaatctcgtcatcagagcaccaggtgac
agccccaacactgatggaattcatgtcgcagacacacaaaatattgtcataagtaacagt
gacattgggacaggtgatgattgtatttcaataataagcgggtcccaaaacgtaagagcc
acagatattacctgcggacctggacatggaataagcattggaagcttgggagcagataac
tcggaagctgaagtctctaatgtggtagtgaacagagcaaccttaacaggaacgactaat
ggagtgagaataaagacttggcagggaggttctggttatgcaaggaacattaaatttttg
aacatagcgatgcaaaatgtgacaaatcccataatcatagatcaatactactgtgatcaa
tcgaagccatgccaagagcaggactcagctgtgcaattaagcaatgtgttgtaccaaaac
ataaaaggaacaagtgcctcagaagtggctatcaaatttgactgcagccgagccgtccct
tgcagacaaatttacgttcaggatgtgattttagaaccccaaggccatggtggcaccatt
gctacatgtgaacatgttagttatgtcaacagaggaaagttttttcctcaatgcactcca
tga
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