Glycine soja (wild soybean): 114388514
Help
Entry
114388514 CDS
T06057
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03020
RNA polymerase
gsj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114388514
09124 Replication and repair
03420 Nucleotide excision repair
114388514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114388514
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114388514
Enzymes [BR:
gsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114388514
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
114388514
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
114388514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
114388514
NCBI-ProteinID:
XP_028204835
LinkDB
All DBs
Position
15:complement(15737534..15745674)
Genome browser
AA seq
1193 aa
AA seq
DB search
MDLEEEQEYDEQMMEEDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
NLTYSAPLYVDVSKRVVKKGHDGEEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLT
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP
PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
DTLMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV
DVNTEVGVVRDIILKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWH
DLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYAGTYTHCEIHPSLILGVCASI
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH
SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN
SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEVKTTNQKKKGA
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaagaggagcaggagtacgacgagcaaatgatggaggaagacgacgacgag
gaagagatcacacaggaagacgcgtgggccgttatctccgcgtacttcgaagagaagggc
ctcgttcgccagcaactcgattccttcgacgagttcatccaaaacaccatgcaggaaatc
gtcgacgagtccgcggacatcgaaattcgacccgagtcgcagcacaatcccggtcaccaa
tccgatttcgccgaaaccatttacaaaatcagcttcggtcagatttacttgagtaagcct
atgatgacggaatctgatggtgaaaccgccacgttgttccccaaggctgctaggttaagg
aaccttacttattctgctcctttgtatgttgatgtctccaaaagggtcgtcaagaagggg
cacgacggggaagaggtcaccgagactcaggatttaaccaaagttttcattggcaaggtt
cctataatgcttcggtctagttattgcacgttgtaccagaattcggagaaggatttgact
gagcttggggagtgtccttatgatcaaggcgggtatttcattattaatgggagtgagaag
gttctgattgctcaggagaagatgagcaccaaccatgtctatgtgttcaagaagaggcag
cccaacaagtacgcctatgtggccgaagttcggtccatggcagagtcacagaacagacca
cctagtactatgttcgtgcgcatgctctctcggactagctccaaagggggttcttcagga
caatatatacgtgccactcttccttacattcgaactgaaattcccatcattattgtgttt
cgagcattgggttttgttgccgataaagatattctagagcatatatgttatgacttctca
gatactctaatgatggagctgctacgtccttccctggaagaagcgtttgtaattcaaaat
caacaggttgcacttgactacattgggaaaagaggagcaactgtaggtgtaaccaaggaa
aagagaattaagtatgctaaggagatccttcaaaaggagatgctccctcatgttggtgtt
ggagaatattgtgagaccaagaaagcctactattttggatatatcattcatcggctactg
ctgtgtgcacttgggcggagggctgaggatgatagggatcattatggaaacaagaggctg
gatctggctggtcctttacttggtggtctttttagaatgctattcagaaagctaacgaga
gatgtcaggggatatgtacagaagtgtgttgataatgggaaagatgttaatctgcaattt
gctatcaaagcaaaaaccatcacaagtggacttaaatactcacttgccactggtaattgg
gggcaagcaaatgctgcagggactagagctggtgtttcacaggtgctgaatcgtttaact
tatgcatccactttatctcacttgcgaagattgaattccccaatagggcgtgaagggaag
ttggccaaaccaagacagctgcataattcacaatggggaatgatgtgtccagcagaaaca
cctgaaggacaagcctgtggactggtgaagaatctggcattgatggtctacataacagtt
ggttcagcagcatatcctattctggagtttttggaagaatggggcacagaaaatttcgag
gaaatctctcctgcagtaattccccaagccacaaaaatttttgtaaatggttgctggatg
gggatccatcgtgaccctgatatgttggtgagaacattgagaaagctgagacgtcgggtt
gatgtgaacactgaagttggggttgtcagagatatcattcttaaagaattgcgtatatat
acagattatggtcgttgcagtcgtcctttattcatcgtggataagcaaaggcttctcata
aagaagaaggatattcatgccttacaacagagggaatcccccgaagatggcggatggcat
gatctagtgtccaagggctttatagaatatattgacacagaagaagaagagactacaatg
atttccatgaccattaatgatcttgtacaagctaggatcaatccagaagatgcgtatgct
ggtacttacactcattgtgaaatccacccatcactgattttgggtgtatgtgcttccatc
ataccatttcctgatcacaatcagtccccacgtaatacttatcagtctgcaatgggaaag
caagcaatgggaatatatgttaccaactaccagtttcgaatggataccttggcctatgtt
ttatattatccacaaaagccactggtcactacaagagccatggagcatcttcatttccgt
caactcccagctggaattaatgccattgtagccattgcctgttactctggttataatcaa
gaagattccgtcatcatgaaccaatcgtcaatagaccgtggattctttcggtctctgttt
ttccgttcatatagagatgaagagaagaagatgggaaccctggtcaaagaagattttggc
cgtcctgatagagctaacaccatgggaatgagacatggttcttatgataagctggatgat
gatggtcttgccccaccaggcacacgagtatctggtgaggatgttatcattggaaagacc
accccaatatctcaggaggaggcacagggacaagctttacgttacacaaggcgtgatcac
agcataagcttacgtcacagtgaaactggaattgttgatcaagttttgctgaccacaaat
gctgatggattgagatttgtgaaagtaagagtgagatctgttcgtataccacagattggt
gataaattcagtagtagacatggtcagaaggggacagttggtatgacttatacacaagaa
gacatgccctggactgtggaaggcattacccctgatattattgtcaatccacatgctatt
ccttctcgaatgacaattggtcagcttattgagtgtatcatggggaaggtggcagcccac
atgggaaaagaaggagatgcaactccttttacagatgttactgtggacaatatcagtaaa
gctctacacaaatgtgggtaccaaatgcgtggttttgagactatgtacaatggtcataca
gggagacgtctaagtgcaatgattttccttggccctacatattaccaaagactgaagcat
atggttgacgacaagatccattctcgtggaaggggtcctgtgcagatcctcactaggcaa
cctgctgagggacgctcacgagatggaggtctccgatttggagagatggaacgagattgc
atgatagctcatggagctgctcacttcttaaaggaaaggttgtttgatcaaagtgatgca
tacagggtccatgtatgtgagcgttgtgggttgatagctattgcaaatctcaagaagaat
tcttttgagtgcaggggatgcaagaacaaaactgacattgttcaggtttacattccttat
gcttgtaagctcctcttccaagagttaatggctatggcaatagctccaagaatgcttaca
aaggaggtcaaaactacaaaccaaaagaagaagggagcctga
DBGET
integrated database retrieval system