KEGG   Glycine soja (wild soybean): 114388514
Entry
114388514         CDS       T06057                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03020  RNA polymerase
gsj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114388514
  09124 Replication and repair
   03420 Nucleotide excision repair
    114388514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gsj03021]
    114388514
   03400 DNA repair and recombination proteins [BR:gsj03400]
    114388514
Enzymes [BR:gsj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     114388514
Transcription machinery [BR:gsj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     114388514
DNA repair and recombination proteins [BR:gsj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      114388514
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 114388514
NCBI-ProteinID: XP_028204835
LinkDB
Position
15:complement(15737534..15745674)
AA seq 1193 aa
MDLEEEQEYDEQMMEEDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
NLTYSAPLYVDVSKRVVKKGHDGEEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLT
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP
PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
DTLMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV
DVNTEVGVVRDIILKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWH
DLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYAGTYTHCEIHPSLILGVCASI
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH
SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN
SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEVKTTNQKKKGA
NT seq 3582 nt   +upstreamnt  +downstreamnt
atggatttggaagaggagcaggagtacgacgagcaaatgatggaggaagacgacgacgag
gaagagatcacacaggaagacgcgtgggccgttatctccgcgtacttcgaagagaagggc
ctcgttcgccagcaactcgattccttcgacgagttcatccaaaacaccatgcaggaaatc
gtcgacgagtccgcggacatcgaaattcgacccgagtcgcagcacaatcccggtcaccaa
tccgatttcgccgaaaccatttacaaaatcagcttcggtcagatttacttgagtaagcct
atgatgacggaatctgatggtgaaaccgccacgttgttccccaaggctgctaggttaagg
aaccttacttattctgctcctttgtatgttgatgtctccaaaagggtcgtcaagaagggg
cacgacggggaagaggtcaccgagactcaggatttaaccaaagttttcattggcaaggtt
cctataatgcttcggtctagttattgcacgttgtaccagaattcggagaaggatttgact
gagcttggggagtgtccttatgatcaaggcgggtatttcattattaatgggagtgagaag
gttctgattgctcaggagaagatgagcaccaaccatgtctatgtgttcaagaagaggcag
cccaacaagtacgcctatgtggccgaagttcggtccatggcagagtcacagaacagacca
cctagtactatgttcgtgcgcatgctctctcggactagctccaaagggggttcttcagga
caatatatacgtgccactcttccttacattcgaactgaaattcccatcattattgtgttt
cgagcattgggttttgttgccgataaagatattctagagcatatatgttatgacttctca
gatactctaatgatggagctgctacgtccttccctggaagaagcgtttgtaattcaaaat
caacaggttgcacttgactacattgggaaaagaggagcaactgtaggtgtaaccaaggaa
aagagaattaagtatgctaaggagatccttcaaaaggagatgctccctcatgttggtgtt
ggagaatattgtgagaccaagaaagcctactattttggatatatcattcatcggctactg
ctgtgtgcacttgggcggagggctgaggatgatagggatcattatggaaacaagaggctg
gatctggctggtcctttacttggtggtctttttagaatgctattcagaaagctaacgaga
gatgtcaggggatatgtacagaagtgtgttgataatgggaaagatgttaatctgcaattt
gctatcaaagcaaaaaccatcacaagtggacttaaatactcacttgccactggtaattgg
gggcaagcaaatgctgcagggactagagctggtgtttcacaggtgctgaatcgtttaact
tatgcatccactttatctcacttgcgaagattgaattccccaatagggcgtgaagggaag
ttggccaaaccaagacagctgcataattcacaatggggaatgatgtgtccagcagaaaca
cctgaaggacaagcctgtggactggtgaagaatctggcattgatggtctacataacagtt
ggttcagcagcatatcctattctggagtttttggaagaatggggcacagaaaatttcgag
gaaatctctcctgcagtaattccccaagccacaaaaatttttgtaaatggttgctggatg
gggatccatcgtgaccctgatatgttggtgagaacattgagaaagctgagacgtcgggtt
gatgtgaacactgaagttggggttgtcagagatatcattcttaaagaattgcgtatatat
acagattatggtcgttgcagtcgtcctttattcatcgtggataagcaaaggcttctcata
aagaagaaggatattcatgccttacaacagagggaatcccccgaagatggcggatggcat
gatctagtgtccaagggctttatagaatatattgacacagaagaagaagagactacaatg
atttccatgaccattaatgatcttgtacaagctaggatcaatccagaagatgcgtatgct
ggtacttacactcattgtgaaatccacccatcactgattttgggtgtatgtgcttccatc
ataccatttcctgatcacaatcagtccccacgtaatacttatcagtctgcaatgggaaag
caagcaatgggaatatatgttaccaactaccagtttcgaatggataccttggcctatgtt
ttatattatccacaaaagccactggtcactacaagagccatggagcatcttcatttccgt
caactcccagctggaattaatgccattgtagccattgcctgttactctggttataatcaa
gaagattccgtcatcatgaaccaatcgtcaatagaccgtggattctttcggtctctgttt
ttccgttcatatagagatgaagagaagaagatgggaaccctggtcaaagaagattttggc
cgtcctgatagagctaacaccatgggaatgagacatggttcttatgataagctggatgat
gatggtcttgccccaccaggcacacgagtatctggtgaggatgttatcattggaaagacc
accccaatatctcaggaggaggcacagggacaagctttacgttacacaaggcgtgatcac
agcataagcttacgtcacagtgaaactggaattgttgatcaagttttgctgaccacaaat
gctgatggattgagatttgtgaaagtaagagtgagatctgttcgtataccacagattggt
gataaattcagtagtagacatggtcagaaggggacagttggtatgacttatacacaagaa
gacatgccctggactgtggaaggcattacccctgatattattgtcaatccacatgctatt
ccttctcgaatgacaattggtcagcttattgagtgtatcatggggaaggtggcagcccac
atgggaaaagaaggagatgcaactccttttacagatgttactgtggacaatatcagtaaa
gctctacacaaatgtgggtaccaaatgcgtggttttgagactatgtacaatggtcataca
gggagacgtctaagtgcaatgattttccttggccctacatattaccaaagactgaagcat
atggttgacgacaagatccattctcgtggaaggggtcctgtgcagatcctcactaggcaa
cctgctgagggacgctcacgagatggaggtctccgatttggagagatggaacgagattgc
atgatagctcatggagctgctcacttcttaaaggaaaggttgtttgatcaaagtgatgca
tacagggtccatgtatgtgagcgttgtgggttgatagctattgcaaatctcaagaagaat
tcttttgagtgcaggggatgcaagaacaaaactgacattgttcaggtttacattccttat
gcttgtaagctcctcttccaagagttaatggctatggcaatagctccaagaatgcttaca
aaggaggtcaaaactacaaaccaaaagaagaagggagcctga

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