Glycine soja (wild soybean): 114396423
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Entry
114396423 CDS
T06057
Name
(RefSeq) uncharacterized protein LOC114396423
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
gsj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114396423
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114396423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114396423
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
114396423
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
114396423
NCBI-ProteinID:
XP_028214199
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Position
18:7275141..7279751
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AA seq
698 aa
AA seq
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MDEGEGGYGESGDPMDQFHRNEAISAVADEGFLGEEEDDDYEDLYNDVNVGEGFLQSLRK
NDDSGFRNDEVEEKKPPPPPPVPDAAGVSIPGVGGGGGSGVVESRVSGRVDGFQNQGYRG
NEVGAKGGIRIELGNQSGNLSEIEDQGGNDGAAMQGIGQQPHGGVVGIVGNEGLVRQGQG
GVGGGGGGGNVNRVGGNGVGNSVSAVTSVNTGGVGGAGGGGGAAGSGGTILFVGDLHWWT
TDAELETELSRYGPVKEVKFFDEKASGKSKGYCQVEFFDPSAATACKEGMNGHVFNGRPC
VVAFASPFTVKKMGEAQINRNQQMNQSAVPQGRRGPADAGAKPGGSNISTGGNYQGGEGN
RGYGRGGGNWGRGNNPGMGNRGPVNPMRNRGGGMGGRGIMGHGGNGFGQGMGGTPPMLHP
QSMMNQGFDPAFGGPMGRMGGYGGFPGAPAPPFSGILPSFPGVGGVGLPGVAPHVNPAFF
GRGMPVNGMGMMPGSVMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEAASDQQYGE
VSHDRAGWPMREKDRGSERDWSGSSERRYRDDRDQGYERDASREKDMGHDHEWSERRHRD
DRETGRERSRDRDRDRERSRDRDRDREKDHRERDRHREDRERYADHHRYRDREAEHDDEW
ERGRSSRTHSKSRLSQEEEHHSRPRDADYVKRRRLTSE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaggcgagggagggtacggtgagagcggcgatcccatggatcagttccaccgt
aacgaagctatatccgccgtcgccgacgagggtttcttgggcgaggaagaagacgacgat
tacgaggacctttacaacgacgtcaacgtcggcgaagggttccttcaatcgttgcgcaag
aacgacgattcggggttccgaaacgacgaggtcgaagaaaagaagcctccgccgccgccg
ccggttccggatgccgccggggtttcgattccgggtgtcggtggcggtggaggaagcggg
gttgtggaatctagggtttcggggagggttgatgggtttcagaatcaagggtatagaggg
aacgaggtgggtgccaaaggtgggattaggattgaattagggaaccaatctggaaatttg
agtgaaattgaggatcagggtgggaatgatggtgctgcaatgcaggggattggacagcaa
cctcatggtggggttgttgggattgtgggaaatgagggtttggtgagacaaggtcaaggt
ggtgttggtggtggtggaggaggagggaatgttaatagggttggtggaaatggtgttgga
aacagtgtgagtgctgttactagtgttaatactggaggagttggaggtgctggtggtggt
ggtggtgctgccggttctggtggtactatattgtttgtgggtgatttgcattggtggact
actgatgccgagcttgaaaccgagcttagtaggtatgggcctgtgaaggaggtgaagttt
ttcgatgagaaggcgagtgggaaatcaaaggggtattgccaggttgagttttttgaccct
tctgctgcaactgcttgcaaggaagggatgaatgggcatgtttttaatgggaggccgtgt
gtcgttgcatttgcttcaccttttaccgttaagaaaatgggggaggctcagataaacaga
aatcagcagatgaaccaatctgctgttcctcagggaaggagggggcctgctgacgcaggg
gctaaacctggtgggagtaatatttcaacgggtggtaattaccaaggtggagaggggaat
agaggttatggaagaggaggaggtaactgggggagaggaaacaatcctggtatggggaat
agagggcctgttaatccaatgaggaacaggggtggtgggatgggtggtagaggtataatg
ggccatggtggaaatggatttggacagggtatgggtggtacccctccaatgttgcatcct
cagtcaatgatgaatcagggttttgatcctgcatttggtggtcccatgggcagaatgggt
ggctatggaggctttcctggtgctccggcgcctccgttttcgggtattttgccttcattc
cctggtgttggaggtgttggtttgcctggagtggcacctcatgttaatccagcctttttt
ggaagagggatgcctgttaatggtatggggatgatgcccggatcagtcatggatggtcct
aatatgggaatgtggtcggatccaaatatgggtggatggggtggtgaagagcccggtggt
gggaaggctggagagtccagttatggggaggaagctgcttcagaccaacagtatggtgag
gtgagtcatgatagagctgggtggcctatgagggaaaaagatagaggttcggaaagggac
tggtctggttcttctgagagaaggtacagagatgatagagatcaaggatatgagagagat
gcatctagagaaaaagatatgggtcatgatcatgaatggtctgaaagaaggcatcgtgat
gatagagaaacgggcagagaacgatcccgtgaccgtgaccgtgatcgtgaacgatctcga
gaccgtgatcgtgaccgcgaaaaggatcaccgtgagcgtgacaggcacagagaagatagg
gagagatatgcagatcatcataggtacagagaccgggaagcagagcacgatgatgagtgg
gagaggggacggtcatcaaggactcacagcaagtcacgattatcgcaagaggaggaacac
cattctagaccaagagatgctgattatgtgaagaggcggcggcttacttctgaataa
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