Glycine soja (wild soybean): 114405116
Help
Entry
114405116 CDS
T06057
Name
(RefSeq) uncharacterized protein LOC114405116
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Module
gsj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114405116
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
114405116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
114405116
NCBI-ProteinID:
XP_028223579
LinkDB
All DBs
Position
3:complement(30349572..30364993)
Genome browser
AA seq
715 aa
AA seq
DB search
MANSACSTSTMDRIEVAIVELTAAQDAIATKLDKLLPLLALFETTQHSSSFPSAKSPPLA
GTMPTPLPMVTSQHSLQMTTPPRSPPFSPPPPIDATSHSPPTLKRTRKATGLRSLAATRP
VGAERPLVHVDPTTGKADADKDSVDDIVCEKYDINKEKWTQFCQSRRDPLWEDVQKKAQD
SLEDHASQGSFVAHGHQDVLTVAIGRQEHPGRVHAVGVGPSAARVNIKESYVYPSSNDPY
TGDSEKYGLYVEENLPRLVALGRLYEGSTTVHNMSLRHDQLKVGVEEVRDVDALIPIPTQ
KGVLGPTKPIDRPDHDVDDPLYLMTLTIPQLFLKPLQVMWDAIVFGMFNDDFPLLIMTCV
LIIGFVSPCLCLRSMVGTKNTFYNVMDFGAHGNGKSDDSHAFSSAWQHTCGTQGTSTLVI
PPKGVFLVSNITLKGPCKARSLDPLILISNLNGLTIDGSGGQIDGFGSTWWKCRSCLRPR
VISFVSCNDLTVRKLSISNSPRAHITIDGCNGAIFSNINIHAPRNSPNTDGFDIAFSKNI
LIEDCTIATGDDCIAINGGSSYINATGIACGPGHGISIGSLGKHNAHETVEEIYVYNCSF
TKTTNGARIKTVPGGTGYAKRITFEKIKLIQTRNPIILDQFYHSVHLTVTYRGFQGTSAN
DKAINLDCGPSGCFNIVLDQIDIVSSDTSKPAHCSCNNAHGTTTSTVPNCSCLLK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggctaactcggcttgttccacgtccactatggaccgcatcgaagtagccatcgtggaa
ctcaccgctgcccaagacgccattgccaccaaattggacaaacttcttccgctgttggcc
ctttttgagaccactcaacactcctcatcttttccctctgcgaagtcaccaccattagct
ggaaccatgccgactccacttcccatggtaaccagccaacactccctgcaaatgactaca
ccacctaggtctcctcctttttctcctcctcctcctattgatgcaacatcacattcccct
cctaccttaaagcggacaagaaaagccacaggcttgagatcattagctgctactagacca
gttggggcagagagacccctggtccatgtggatcctacaactgggaaagccgacgctgac
aaggacagtgtcgatgacattgtatgcgaaaagtatgacattaacaaggagaagtggacc
caattttgtcagagtcgcagagaccctttgtgggaggatgtgcaaaagaaggcacaggat
tcgttggaggatcatgcctcacaaggttcctttgtcgcccatggacatcaggatgtattg
actgttgccattgggcgacaagaacaccctggtcgtgtgcatgctgttggagttggtcct
tcagctgctcgtgtcaacataaaggagagctatgtttatccctcaagcaacgacccatac
acgggtgactcagagaaatacgggttatacgttgaagaaaaccttccccgcctggttgcc
ctaggaagactttatgagggatccacaaccgttcacaacatgtctttgcgccatgatcaa
ctcaaggttggtgttgaggaagttagagatgtagatgctctcattcctatacccactcaa
aagggagttctgggaccaacgaaacctatagataggccggatcatgatgtcgatgatcct
ctatatctaatgacattgaccatcccacagctttttctaaagccgttgcaggttatgtgg
gatgctatcgtgtttgggatgtttaatgacgacttccccttgctaataatgacttgtgtt
ttgattattggttttgtttcaccatgtttatgtttgaggtcgatggttggaaccaaaaac
acattttataatgtgatggactttggtgctcatggcaatgggaaatctgatgattctcat
gcattttcaagcgcatggcaacacacatgtggaacacaagggacatcaactctagttata
ccaccaaaaggagtattcttggtgtcgaacataaccctgaaaggaccttgcaaggccaga
agtctggatcctttgattttgatctcaaacctaaacggtctcacgattgatggaagcgga
ggacaaatcgatggcttcggttctacttggtggaaatgcagaagttgtcttcgaccaagg
gtcattagttttgtatcttgcaatgatcttactgttcgtaaactgagcatctccaatagt
ccaagagctcacataacgattgatggttgtaacggtgccatattctctaatatcaatatt
catgctcctaggaacagccccaacactgatggatttgatattgctttttccaaaaatatc
ttgatcgaagattgtactatagcaactggcgatgattgtattgccatcaatggaggctcc
tcatacatcaatgctactggaattgcttgtggtcctggccatggaataagcattggcagc
ctgggtaaacacaacgctcatgaaacagtggaagaaatttatgtatacaattgcagtttc
accaaaacaacaaatggagcaagaatcaagacagttccgggtggaacaggttatgcaaaa
agaatcacgtttgagaaaatcaaattaatacagactcgcaacccaataattttagaccaa
ttctatcatagtgttcacttaacggtgacataccgtgggtttcaaggaacatctgcgaat
gacaaagctattaacttagattgtggcccatcaggttgttttaacattgtattggatcaa
attgacattgtctcttctgatacatcaaaaccggctcattgttcatgcaataatgcccat
ggaacaactacatctactgttccaaattgctcttgtctattgaaatga
DBGET
integrated database retrieval system
