Geobacter sulfurreducens KN400: KN400_0530
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Entry
KN400_0530 CDS
T01940
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gsk
Geobacter sulfurreducens KN400
Pathway
gsk03030
DNA replication
gsk03410
Base excision repair
gsk03420
Nucleotide excision repair
gsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KN400_0530 (polA)
03410 Base excision repair
KN400_0530 (polA)
03420 Nucleotide excision repair
KN400_0530 (polA)
03440 Homologous recombination
KN400_0530 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsk03032
]
KN400_0530 (polA)
03400 DNA repair and recombination proteins [BR:
gsk03400
]
KN400_0530 (polA)
Enzymes [BR:
gsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KN400_0530 (polA)
DNA replication proteins [BR:
gsk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KN400_0530 (polA)
DNA repair and recombination proteins [BR:
gsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KN400_0530 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KN400_0530 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
HHH_5
ATP1G1_PLM_MAT8
baeRF_family2
HHH
Motif
Other DBs
NCBI-ProteinID:
ADI83393
LinkDB
All DBs
Position
559969..562644
Genome browser
AA seq
891 aa
AA seq
DB search
MATDTLFLIDGSSYIYRAYFAIRHLSSPAGFPTNALYGFTQMLLKVIKDHHPGRLAVVFD
KGRTTFRTEIYPDYKANRAAMPDDLVPQIGPIKEMVRAFSIPVLELEGYEADDIIGTIAR
RCEEQGLEAVVVTGDKDLMQIVSDRIRLLDTMKDRVSGIPEVVERFGVGPGQVIDILGLA
GDTSDNIPGVPGIGEKTATKLIQEFGSLDALLERAGEVKGKTGERLREFAEQARLSRRLA
TIVRDVPLDFDLDAFAVAPADNRRLAELFKEYGFTTLMKELTSEATLTTEHYRTIFAEAD
FRALLADLAGAGVFSVDLETTSLNPLEADIVGISLSFRDHEACYIPVGHAYDGAPAQLDR
TLVLEGLRPLLTDPAVRKVGQNLKYDYQVLRRHGIVMAGVWCDTMVASYLINPVRSGHGL
DSLAVEHLDHRMISYEEVAGKGKDQLNFARVPVEKASTYSCEDADAAWLLHRLFLPRVAE
AGMERLFFDLEMPLVPILAEMETAGVKLDLALLGELSAGLGSQLTALEEQVMALAPEPFN
LNSPKQLGEVLFEKMKLPAGKKTKTKTGWSTNVEELERLAEAGHEIAAAILRYRGLAKLK
STYTDALPRLVHPASGRVHTSYNQTVTNTGRLSSSEPNLQNIPVRTDEGRKIRRAFIAEE
GHLILSADYSQIELRVLAHLSEDRVFCDAFARDEDIHTRTAAEVFGLFPEMVTPEMRRQA
KAINFGVIYGQGAFSLAKQLGITTKVAKEFIDNYFARHPGARAFLDGCVAEAEARGYVTT
LMGRRLPIPDIASSNGNIRAFAQRNAVNYPIQGSAADIIKAAMVRVTERMRREGLTSRLI
MQVHDELVFEVPEGERTAMERLVQHEMEHAAPLRVPLRADVNVGRNWSEAH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgacacgctgtttctcatcgacggctcctcgtacatctaccgggcctacttc
gccatcaggcatctgtcgtcgcccgcgggtttccccaccaatgcgctctacggcttcacc
cagatgctcctcaaggtcatcaaggatcaccatcccggccgcttggccgtggtcttcgac
aaggggcgcaccaccttccgcaccgagatctaccccgattacaaggcgaaccgggccgcc
atgcccgatgatctggttccccagatcggacccatcaaggagatggtccgggccttcagc
atcccggttctggagttggagggctacgaggccgacgacatcatcggcaccattgcccgg
cggtgcgaggagcagggtttggaggccgtggtcgtcaccggcgacaaggatctgatgcag
atcgtgagcgaccgcatccggctgctcgacaccatgaaggaccgggtgtccggcatcccc
gaggtggtggagcgcttcggcgtcggccccgggcaggtcatcgacatactgggcctggcg
ggcgacacctccgacaacatccccggcgtccccggcatcggcgaaaagaccgccaccaag
ctgatccaggagtttggctctctggacgccctgctggagcgggccggcgaggttaaggga
aagaccggcgagcgcctgcgcgagttcgcggagcaggcccggctttcccggcgtctcgcc
accattgtccgcgacgtgcccctggacttcgacctcgacgcctttgccgtggcccccgcc
gacaatcgccgattggccgaactcttcaaggaatatgggttcacgaccctcatgaaggag
ctgaccagcgaggccaccctgaccaccgagcactaccgcaccattttcgcggaggccgat
ttccgggccctgctcgccgacctggccggggccggggtcttttcggtggacctggaaacc
acgagcctcaatcctcttgaggcggacatcgtgggcatctccctgtcgttccgggatcac
gaagcctgctacatcccggtggggcacgcctatgacggcgccccggcccagctcgaccgc
accctggtgctggaggggctgcggccgctcctcaccgaccccgcggtgcgcaaggtgggg
cagaacctcaagtacgactaccaggtgctgcgccgtcacggcatcgtcatggccggggtc
tggtgcgataccatggtcgcctcctatctgatcaacccggtccggtcgggccacggcctg
gactccctggcggtggagcacctggaccaccggatgatctcctacgaggaggtggccggg
aagggaaaggaccagctgaactttgcccgggtgccggtggaaaaggcgtccacctattcc
tgcgaggatgccgacgccgcctggctcctgcaccggctgttcctgccccgggtggccgag
gccggcatggagcgcctgttcttcgatctggagatgccgctcgtaccgatcctggccgag
atggaaacggccggggtcaagctggacctggcgctgctgggggaactctccgccgggctc
ggcagccagttgacggctctggaggagcaggtcatggcgctcgcgcccgagccgttcaac
ctcaactcgcccaagcagctgggagaggtgctgttcgagaaaatgaagctcccagccggg
aaaaagaccaagaccaaaaccggctggtccaccaacgtggaggagctggaacggctggcc
gaggccgggcacgagatcgccgcggccatcctccggtaccgggggctcgccaagctcaag
tccacctacaccgatgccctgcccaggctggtgcacccggccagcgggagggtgcacacc
tcctacaaccagaccgtcaccaacaccgggcggctctcgtcctcggagcccaacctgcag
aacatcccggtccgcaccgacgaggggcggaagatccggcgcgccttcatcgcggaggag
ggccacctgatcctctcggccgactactcccagatcgagctgcgggtcctggcccatctc
tcggaggaccgggtcttctgcgacgcctttgcccgggacgaggacatccacacccggacc
gcggccgaggtgttcggcctcttcccggagatggtgacgcccgagatgaggcgccaggcc
aaggccatcaacttcggggtcatctacggacagggggccttcagtctggccaagcaactg
gggatcaccaccaaggtggccaaggagttcatcgacaactacttcgcccgccatcctggc
gcccgggccttcctggacggctgcgtggccgaggccgaggccaggggctacgtgaccacc
ctcatggggcggcggctccccattccggacatcgccagcagcaacggcaacatccgggcc
tttgcccagcgcaacgccgtcaactaccccattcagggctcggccgcggacatcatcaag
gcggccatggtgcgggtcacggagcggatgcggcgagaggggctcaccagtcgcctgatc
atgcaggtccacgacgaactggtcttcgaggtgccggagggcgaacggaccgccatggag
cggctcgtgcaacacgagatggagcatgctgcccccctccgggtgccgctgcgggcggac
gtgaacgtggggcgtaactggagcgaggcccactga
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